| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1670 |
|---|
| Symbol | |
|---|
| ID | 9138371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2155744 |
|---|
| End bp | 2159016 |
|---|
| Gene Length | 3273 bp |
|---|
| Protein Length | 1090 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | Aldehyde Dehydrogenase |
|---|
| Protein accession | YP_003629700 |
|---|
| Protein GI | 296121922 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAC TCCCCCCCCC TGAAATTTCC GTCAATCTGA TTGATTCTGC TTCCTTCATG
GAGAGCGTGA CTCAGCGCGC CGAGCAACTG CTGGTCAAAT CCCACCTGGC TCAAACCTCG
GCCGAGAAGA AAGCCGCCCA AAATGTGGCA GGTATGATGA ACGACCGTGC CGGGAAGTCG
CTGACGCTGG CGATGGTTGA CGAAGTCTTT CGCAGCCATC AGCCAGCCCG ACAGGCCCAA
AGGTGGCAAG CGGCATTAAA CAGGTTTGGT ATTCCCGGAT ATCTCCCGTG GATTGATCGC
TGCCTCATGC AGATTGGCTC TCTTGCAAGT CGAATTGCTC CGGGGATCGT CATGCCTTTA
GTGACGAGTC GACTGCAGAG TGAAAGCTCG AATGTCATTC TCGATGCCAC ACCGAGTGAA
CTCAAAAGGC ACTTTGCCAC ACGCCAGAAC GAGGGCTTTC GCTGCAACCT GAATCATCTG
GGAGAGGCAA TTCTCGGTGA GGAAGAAGCG CAACACCGCC TAAAGCTCAT TCTTGGGTAT
CTGGCCAATC CACTTGTCGA CTACGTTTCG GTCAAGATCA CTGCTATTTT CAGCCAGGTG
AATATCGTTG CGTGGGAAGA AACCAGTAGC GAGATTTGCG AACGCCTGAG AACAATCTTC
AGAGCAGCAC TTCCACAAGG AAAATTCGTC AATCTCGATA TGGAAGAGTA TCGAGATCTG
GCGATTACCA TCGAAGCGTT TCAAACCGTG CTCGATGAGC CCGAGTTTCG TCAGCTATCA
GCCGGCATTG TGCTTCAGGC GTATCTGCCG GATTCATTCG CAGCCCAGAA GAACTTGACG
GCATGGGCCA GAAAGCGAGT TGAATCTGGT GGCAAAGATA TCAAAGTCCG CCTTGTGAAA
GGGGCAAATC TGGCCATGGA ACAGGTCGAA GCCGAACTTC ACGGCTGGAA TCAGGCGCCC
TATCCCACCA AAGCCGATAC AGATGCCAAC TTCCGGCGTA TGCTCGAGTA TGGCTGCCAG
CCCGAACATG CCGAGTACGT TCGTTTAGGA GTGGCTTCCC ACAATCTGTT CGATATTGCG
CTCGTGCTGG AACTCCGCGA GCGTCTGGGG ACAACCGAAC GTGTCGAACT TGAAATGCTG
GAAGGGATGG CCAACCATCA GGCGCGGGTG GTACGTGATG AAGCCCATGG TTTGTTGCTG
TACTCACCCG TGGTGCAGAA GGCTGATTTT TTCAGTGCCA TGTCGTATCT GGTTCGCCGA
CTCGATGAGA ACACGGCACC CGAAAACTTC TTGCGAGCGG CCTTTTCTCT CGAACCAGAT
TCACCCACCT GGCATGAGCA GAAACAACGA TTTGAAGATG GCTGGAACCA TCGAACAGCC
GTGAGTGCTC TCTCTCGACG GATCGAACCA CGCCACGATC CGCAGACGAT GTCGACCTTT
GAAAACGAGC CAGACAGCGA CTGGACTCAG CTCCAGGTTC GCGAACAACT CAATCAGGCC
ATTGTCAACT GGTCAAACCC GGTCTTACCG CCACTGGCCG AACTTGATCT TGTGCTCGAT
CAGGCAGTTG TTTCGCAGCC TGCATGGGAA TCGAGAACGA TCGAAGAACG CCGGGAGATC
CTCATATCAG CCGCAAACGT CATGCGACAG GATCGTTTCC GAACGATTGC CTGCATGCAG
CAGGAAGCGA AAAAGGCGAT CTGGGAAGCC GATGCCGAAA TTTCTGAGGC GATCGATTTC
GCCCGTTATT ATGCGATGGA ATTTGAGATT CCTGCCTCGA TGAAGGCGCA AGCACTGGGA
GTGGTGGTTG TCACTCCTCC ATGGAATTTT CCTTATGCAA TACCGGCTGG AGGAGTTCTC
GCTGCTCTCA TGGCGGGTTG CAGTGTCATT CTCAAACCGG CTCCAGAAAC CGCAGTCACG
GCATACCTGC TGGCCAGTCA ACTCTGGGAA GCTGGCGTCC CCCGGGATGT CCTGCAGTTC
TTTCCTTGTG AAGACGGTGA AGTCGGCAAA GCTCTGATCA CCGATTCTCG TGTCGCTGCC
GTCGTGCTCA CTGGTGGATG GGAAACCGCA CAGATGTTCC GCAACTGGCG GCCATCGCTG
CGTCTATATG CTGAAACCAG TGGTAAGAAC GCCATGGTCA TCACTGCTCA GGCAGACCGT
GAACTGGCGA TTAAAGATCT TGTGAAATCC GCGTTCGGAC ATTCAGGACA AAAGTGCAGT
GCTGCCAGCC TCGCGATTGT CGATCAGGAG ATTTATCACG ATCCAGCTTT TCGCAGACAA
TTGCGCGATG CCGCAGCCAG CTTGTTCGTA GGCCCAGCGA CTGATCGACG CAGTGTTGTC
ACACCGCTGA TTCGCCCGGC CAGCCCCGCA TTACATCGAG CCTTAACGAT TCTCGAACCC
GGAGAAGAAT GGCTGCTGGA ACCCGTTCAA AGCCCCCAAG ATCCTTGCCT GTGGTCTCCG
GGGATCAAAC TCGGCGTGAA ACCTGGCTCA TGGTTCCACC TCACCGAATG TTTCGGCCCG
GTTCTGGGAA TCATGTGCTC GACCACTCTT GATGAAGCGA TCAAGTGGCA AAATGCGACA
TCCTTCGGTT TGACGGCCGG CCTGCATACT CTCGACAAAG AAGAGCAGGT CTACTGGAAA
GATCGCGTCG AGGCCGGAAA CGTCTACATC AACCGCTCAA CAACGGGAGC CATTGTTCGT
CGGCAGCCTT TTGGTGGTTG GAAGAGATCA AGTATTGGCC CCGGTGCCAA AGCCGGTGGC
CCGAATTACA ACCATCTTTT CACACGATTG ACCGACAGGA ACAGCTTCGT TTCACCAGTT
GAGATTGAGC ATAGCTACCA GAAAGCCTGG AATCAGCAGT ACAGCGTGAG TCATGATCCA
TCGAAATTGC ACTGCGAGCG AAATGAATTC CGTTATCGTC CCTCTCGGGG TGTCATTCTG
AGAGTTGGTA TTTGTAACGA AACGACGGCC TCTCAAGCGA TTGAGCGTGC TCAACTGGCT
GCGCAGATCA CTGGCGTCCG GCTGATCATC AGCGATTCGA GGATAGAATC GGAAGCCGAT
TTTCTCAGGA GTCTTTCAGA CCATGCAGGC CAGGCCGAAT TTCTGAGAAT TGTCGGAGCT
GTCTCTGAAG CAGTCTTTAA AGCTGCGGCA GATCTTGATC TCAACTGGAT CGATGCCCCT
TTGACAGCCC ATGGCACTAC GGAACTTCGA TACTGGTTAC GAGAACAGAG TGTTTCCCAG
ACACGACACC GTTACGGATT AATCACCGAT TGA
|
|---|
| Protein sequence | MKTLPPPEIS VNLIDSASFM ESVTQRAEQL LVKSHLAQTS AEKKAAQNVA GMMNDRAGKS
LTLAMVDEVF RSHQPARQAQ RWQAALNRFG IPGYLPWIDR CLMQIGSLAS RIAPGIVMPL
VTSRLQSESS NVILDATPSE LKRHFATRQN EGFRCNLNHL GEAILGEEEA QHRLKLILGY
LANPLVDYVS VKITAIFSQV NIVAWEETSS EICERLRTIF RAALPQGKFV NLDMEEYRDL
AITIEAFQTV LDEPEFRQLS AGIVLQAYLP DSFAAQKNLT AWARKRVESG GKDIKVRLVK
GANLAMEQVE AELHGWNQAP YPTKADTDAN FRRMLEYGCQ PEHAEYVRLG VASHNLFDIA
LVLELRERLG TTERVELEML EGMANHQARV VRDEAHGLLL YSPVVQKADF FSAMSYLVRR
LDENTAPENF LRAAFSLEPD SPTWHEQKQR FEDGWNHRTA VSALSRRIEP RHDPQTMSTF
ENEPDSDWTQ LQVREQLNQA IVNWSNPVLP PLAELDLVLD QAVVSQPAWE SRTIEERREI
LISAANVMRQ DRFRTIACMQ QEAKKAIWEA DAEISEAIDF ARYYAMEFEI PASMKAQALG
VVVVTPPWNF PYAIPAGGVL AALMAGCSVI LKPAPETAVT AYLLASQLWE AGVPRDVLQF
FPCEDGEVGK ALITDSRVAA VVLTGGWETA QMFRNWRPSL RLYAETSGKN AMVITAQADR
ELAIKDLVKS AFGHSGQKCS AASLAIVDQE IYHDPAFRRQ LRDAAASLFV GPATDRRSVV
TPLIRPASPA LHRALTILEP GEEWLLEPVQ SPQDPCLWSP GIKLGVKPGS WFHLTECFGP
VLGIMCSTTL DEAIKWQNAT SFGLTAGLHT LDKEEQVYWK DRVEAGNVYI NRSTTGAIVR
RQPFGGWKRS SIGPGAKAGG PNYNHLFTRL TDRNSFVSPV EIEHSYQKAW NQQYSVSHDP
SKLHCERNEF RYRPSRGVIL RVGICNETTA SQAIERAQLA AQITGVRLII SDSRIESEAD
FLRSLSDHAG QAEFLRIVGA VSEAVFKAAA DLDLNWIDAP LTAHGTTELR YWLREQSVSQ
TRHRYGLITD
|
|---|
| |