| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0402 |
|---|
| Symbol | |
|---|
| ID | 6109310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 431220 |
|---|
| End bp | 432692 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641620159 |
|---|
| Product | betaine aldehyde dehydrogenase |
|---|
| Protein accession | YP_001747277 |
|---|
| Protein GI | 170719589 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTT TCGGAACGCA AAAACTCTAC ATTGACGGCG GTTATGTCGA CGCTGGCAGC
GATGCCACCT TCGAAGCCAT CAACCCGGCG ACCGGCGAAG TCCTCGCCCA CGTGCAGCGC
GCCACTCAGG CCGACGTCGA GAAAGCCGTC GAAAGCGCCG AGCGCGGTCA GAAAATTTGG
GCCGCAATGA CTGCCATGCA GCGTTCGCGC ATCCTGCGCC GTGCCGTCGA CATTCTGCGC
GAGCGCAACG ACGAGCTGGC CATGCTGGAA ACGCTGGACA CCGGCAAGTC GTACTCCGAA
ACCCGCTACG TCGACATCGT CACTGGCGCC GACGTGCTGG AATACTACGC AGGCCTGGTA
CCGGCCATCG AAGGCGAGCA GATTCCGCTG CGTGAAAGCT CGTTCGTCTA CACCCGCCGC
GAGCCGCTGG GCGTGACCGT CGGTATCGGT GCCTGGAACT ACCCGATCCA GATCGCCCTG
TGGAAGTCCG CCCCGGCCCT GGCCGCCGGC AACGCGATGA TCTTCAAGCC TTCGGAAGTC
ACCTCGCTGA CCACCCTGAA ACTGGCGGAG ATCTACACCG AAGCCGGCCT GCCGGACGGC
GTATTCAACG TGCTGACCGG CAGCGGCCGC GAAGTCGGCA CCTGGCTGAC CGAACACCCA
CGCATCGAGA AAGTTTCCTT CACCGGCGGC ACCACCACCG GCAAGAAAGT CATGGCCAGC
GCTTCGAGCT CCTCGCTCAA GGAAGTCACC ATGGAGCTGG GTGGCAAGTC GCCGCTGATC
ATCTGCGCCG ACGCCGACCT GGACAAGGCC GCCGACATCG CCATGATGGC CAACTTCTAC
AGCTCCGGTC AGGTCTGCAC CAACGGTACC CGCGTGTTCA TCCCTGCCCA GATGAAAGCG
GCCTTCGAAG CCAAGATCGC CGAGCGCGTT GCCCGTATCC GCGCCGGCAA CCCGGAAGAC
GAAAACACCA ATTTCGGCCC GCTGGTCAGC TTCCAGCACA TGGAAAGCGT TCTGGGCTAC
ATCGCCAAGG GCAAGCAAGA GGGTGCCCGC GTACTGTGCG GCGGCGAGCG TCTGACCGAA
GGTGATTTCG CCAAGGGTGC CTTCGTGGCC CCGACCGTGT TCACCGATTG CACCGACGAC
ATGACCATCG TCAAGGAAGA GATCTTCGGC CCGGTGATGA GCATCCTCAC CTACGAAACC
GAAGAAGAAG TCATCCGTCG CGCCAATGAC ACCGAATACG GCCTGGCCGC AGGCGTGTGC
ACCAACGACA TCACCCGCGC CCACCGCATC ATCCACAAGC TCGAAGCCGG CATCTGCTGG
ATCAACGCCT GGGGTGAATC GCCGGCCGAA ATGCCGGTCG GTGGCTACAA GCAGTCGGGC
GTCGGCCGTG AAAACGGCAT CAGCTCGCTG GCGCAATACA CTCGCATCAA GTCGGTCCAG
GTCGAACTGG GCGGCTACTC GTCGGTCTTC TAA
|
|---|
| Protein sequence | MARFGTQKLY IDGGYVDAGS DATFEAINPA TGEVLAHVQR ATQADVEKAV ESAERGQKIW
AAMTAMQRSR ILRRAVDILR ERNDELAMLE TLDTGKSYSE TRYVDIVTGA DVLEYYAGLV
PAIEGEQIPL RESSFVYTRR EPLGVTVGIG AWNYPIQIAL WKSAPALAAG NAMIFKPSEV
TSLTTLKLAE IYTEAGLPDG VFNVLTGSGR EVGTWLTEHP RIEKVSFTGG TTTGKKVMAS
ASSSSLKEVT MELGGKSPLI ICADADLDKA ADIAMMANFY SSGQVCTNGT RVFIPAQMKA
AFEAKIAERV ARIRAGNPED ENTNFGPLVS FQHMESVLGY IAKGKQEGAR VLCGGERLTE
GDFAKGAFVA PTVFTDCTDD MTIVKEEIFG PVMSILTYET EEEVIRRAND TEYGLAAGVC
TNDITRAHRI IHKLEAGICW INAWGESPAE MPVGGYKQSG VGRENGISSL AQYTRIKSVQ
VELGGYSSVF
|
|---|
| |