Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5063 |
Symbol | betB |
ID | 1041862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5774125 |
End bp | 5775597 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637148462 |
Product | betaine aldehyde dehydrogenase |
Protein accession | NP_747164 |
Protein GI | 26991739 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.921344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGTT TCGGAACGCA AAAACTCTAC ATTGATGGCG CTTACGTCGA CGCTGGCAGC GATGCCACTT TCGAAGCCAT CAACCCGGCC ACCGGCGAAG TCCTCGCCCA CGTACAGCGT GCTACCGAGG CTGACGTCGA GAAGGCCGTG GAAAGCGCCG AGCGTGGCCA GAAAGTCTGG GCTGCGATGA CTGCCATGCA GCGTTCGCGC ATCCTGCGCC GCGCCGTCGA CATCCTGCGC GAGCGCAACG ATGAGCTGGC CATGCTGGAA ACCCTGGACA CCGGCAAGTC GTACTCCGAA ACCCGCTACG TCGACATCGT TACCGGCGCC GACGTGCTGG AATACTACGC AGGCCTGGTA CCGGCCATCG AAGGCGAGCA GATCCCGCTG CGCGAATCGT CCTTCGTCTA CACCCGCCGC GAGCCGCTGG GCGTGACCGT GGGTATCGGT GCCTGGAACT ACCCGATCCA GATCGCCCTG TGGAAATCTG CCCCGGCCCT GGCCGCTGGC AACGCGATGA TCTTCAAACC GTCGGAAGTC ACCTCGCTGA CCACCCTGAA ACTGGCCGAG ATCTACACCG AAGCCGGCCT GCCGAACGGC GTGTTCAACG TTCTGACCGG CAGCGGCCGC GAAGTCGGCA CCTGGCTGAC CGAGCACCCG CGCATCGAAA AAGTGTCCTT CACCGGCGGC ACCACCACCG GCAAGAAAGT CATGGCCAGC GCCTCCAGCT CTTCGCTGAA GGAAGTGACC ATGGAGCTGG GCGGCAAGTC GCCACTGATC ATCTGTGCCG ACGCCGACCT GGACAAGGCC GCTGACATCG CCATGATGGC CAACTTCTAC AGCTCGGGCC AGGTGTGCAC CAACGGCACC CGCGTGTTCA TCCCGGCTGA AATGAAGGCG GCCTTCGAAG CCAAGATCGC CGAGCGCGTT GCCCGCATCC GCGTTGGCAA CCCGGAAGAC GAAAACACCA ACTTCGGCCC GCTGGTCAGC TTCCAGCACA TGGAAAGCGT GCTGGGCTAC ATCGCCAAAG GCAAGGAAGA AGGTGCCCGC GTGCTGTGCG GCGGCGAGCG TCTGACTGCC GGTGACTTCG CCAAAGGTGC CTTCGTTGCG CCGACGGTGT TCACCGACTG CACCGACGAC ATGACCATCG TCAAAGAAGA GATCTTCGGC CCGGTGATGA GCATCCTCAC CTACGAAACC GAAGAAGAAG TGATCCGCCG TGCCAACGAC ACCGACTACG GCCTGGCCGC CGGCGTCTGC ACCAACGACA TCACCCGCGC CCACCGCATC ATCCACAAGC TCGAAGCCGG TATCTGCTGG ATCAACGCCT GGGGTGAATC GCCGGCCGAA ATGCCGGTAG GTGGCTACAA GCAGTCGGGC GTCGGCCGTG AAAACGGCGT CAGCTCGCTG GCTCAATACA CTCGCATCAA GTCGGTCCAG GTCGAGCTGG GCGGCTACAA CTCGGTTTTC TGA
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Protein sequence | MARFGTQKLY IDGAYVDAGS DATFEAINPA TGEVLAHVQR ATEADVEKAV ESAERGQKVW AAMTAMQRSR ILRRAVDILR ERNDELAMLE TLDTGKSYSE TRYVDIVTGA DVLEYYAGLV PAIEGEQIPL RESSFVYTRR EPLGVTVGIG AWNYPIQIAL WKSAPALAAG NAMIFKPSEV TSLTTLKLAE IYTEAGLPNG VFNVLTGSGR EVGTWLTEHP RIEKVSFTGG TTTGKKVMAS ASSSSLKEVT MELGGKSPLI ICADADLDKA ADIAMMANFY SSGQVCTNGT RVFIPAEMKA AFEAKIAERV ARIRVGNPED ENTNFGPLVS FQHMESVLGY IAKGKEEGAR VLCGGERLTA GDFAKGAFVA PTVFTDCTDD MTIVKEEIFG PVMSILTYET EEEVIRRAND TDYGLAAGVC TNDITRAHRI IHKLEAGICW INAWGESPAE MPVGGYKQSG VGRENGVSSL AQYTRIKSVQ VELGGYNSVF
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