| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2916 |
|---|
| Symbol | |
|---|
| ID | 6089116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 3213730 |
|---|
| End bp | 3215202 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641597985 |
|---|
| Product | betaine aldehyde dehydrogenase |
|---|
| Protein accession | YP_001721643 |
|---|
| Protein GI | 170025138 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGCT ACGGCTTGCA AAAACTTTAT ATCAACGGCG CGTACACCGA CAGCACCAGT
GGTGATACTT TCGATGCCGT GAACCCCGCG AATGGCGAAT GCATTGCACA ACTCCAGGCC
GCCAACGCAC AGGATGTTGA TAAGGCGGTA GCCGCCGCCA AACAAGGTCA GCCTGTGTGG
GCAGCGATGA CCGCGATGGA ACGTTCACGC ATCTTGCGCC GGGCCGTGGA TATCTTGCGT
GATCGTAATG ATGAACTGGC GGCAATTGAA ACGGCAGACA CCGGTAAACC CCTATCCGAA
ACCCGATCTG TGGACATCGT TACCGGTGCT GATGTGCTGG AATATTATGC TGGCCTAATC
CCCGCCCTTG AAGGGCAACA GATCCCACTA CGTGGCAGCG CATTTGTCTA TACCCGCCGT
GAGCCACTGG GCGTGGTTGC CGGTATTGGT GCCTGGAACT ATCCCATTCA GATCGCTTTG
TGGAAATCTG CACCGGCGCT GGCGGCGGGC AACGCTATGA TCTTCAAACC AAGTGAAGTG
ACATCGCTGA CCGCACTGAA ATTGGCGGAA ATCTACACCG AAGCGGGTTT ACCGGCTGGC
GTATTTAACG TATTGACCGG CAGTGGTGAC CAGGTTGGGC AGATGCTGAC AGAGCATCCG
GGTATTGCAA AGGTCTCCTT CACCGGGGGG ATTGCTAGCG GTAAAAAGGT GATGGCTAAC
GCCGCGGGAT CGACCCTGAA AGATGTCACC ATGGAGTTGG GCGGAAAGTC CCCACTAATT
ATTTTTGCTG ATGTCGATCT CGATAAGGCC GCTGACATTG CGATGATGGC CAATTTCTAC
AGCTCAGGAC AAGTCTGCAC CAACGGCACG CGAGTTTTTG TCCCGCAGGC GTTACAGGCC
GCGTTTGAGC AGAAAATCGT TGAACGGGTC AAGCGGATTC ATATTGGTGA CCCAAGCGAT
GAACGAGTCA ACTTTGGCCC GTTGGTTAGC TTCCAGCACC GCGATTCAGT GATGCGTTAC
ATTGACAGCG GTAAACGGGA AGGCGCAACC CTGCTGATCG GGGGATGCAG TCTGACCGAG
GGCGCACTGG CACACGGGGC CTATGTCGCC CCTACGGTAT TCACCCACTG CCGTGATGAC
ATGCAAATTG TGCGTGAAGA GATCTTCGGA CCGGTGATGA GCATTCTTAG TTATCAAAGC
GAAGAGGAAG TCATTCGCCG CGCCAATGAT ACCGAGTACG GTTTAGCGGC GGGGGTCGTT
ACACAGGATT TGAACCGTGC CCATCGCGTG ATTCATCAAC TGCAAGCGGG TATCTGCTGG
ATCAATACTT GGGGCGAATC GGCACCAGAG ATGCCTGTAG GCGGATATAA GCATTCTGGT
GTAGGCCGTG AAAACGGTAT CAGCACGCTG GAACATTACA CGCAAATCAA ATCAATTCAG
GTTGAGTTAG GCAGCTTCAA TTCTGTTTTT TAA
|
|---|
| Protein sequence | MSRYGLQKLY INGAYTDSTS GDTFDAVNPA NGECIAQLQA ANAQDVDKAV AAAKQGQPVW
AAMTAMERSR ILRRAVDILR DRNDELAAIE TADTGKPLSE TRSVDIVTGA DVLEYYAGLI
PALEGQQIPL RGSAFVYTRR EPLGVVAGIG AWNYPIQIAL WKSAPALAAG NAMIFKPSEV
TSLTALKLAE IYTEAGLPAG VFNVLTGSGD QVGQMLTEHP GIAKVSFTGG IASGKKVMAN
AAGSTLKDVT MELGGKSPLI IFADVDLDKA ADIAMMANFY SSGQVCTNGT RVFVPQALQA
AFEQKIVERV KRIHIGDPSD ERVNFGPLVS FQHRDSVMRY IDSGKREGAT LLIGGCSLTE
GALAHGAYVA PTVFTHCRDD MQIVREEIFG PVMSILSYQS EEEVIRRAND TEYGLAAGVV
TQDLNRAHRV IHQLQAGICW INTWGESAPE MPVGGYKHSG VGRENGISTL EHYTQIKSIQ
VELGSFNSVF
|
|---|
| |