Gene Swit_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3017 
Symbol 
ID5200045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3303092 
End bp3304528 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content73% 
IMG OID640582566 
Productaldehyde dehydrogenase 
Protein accessionYP_001263505 
Protein GI148555923 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGC TGCTGCCCCA TCGCATCGGC GGCGAGCGGA TCGCGGGCCC GGCGGCGGCC 
GAGCGTCGCA ACCCGTCCGA CCTGTCCGAT CTGGTCGCGA CGACGCCGGA GGGCGACGAC
GCGCTGATCG ACCGGGCGAT CGCGGCCGCG GCGGCCGCCC AGCCGGGCTG GGCCGCGCGC
TCGCCCGAGG CGCGGGGCGA CATCCTCGAC CGGGCCGCCG CGTTGCTGAT CGAGCGAGCC
GACGACCTGG GCGTCCTGCT CGCGCGCGAG GAAGGCAAGA CCTGTGCCGA GGGCCGGGCG
GAGGTGGTGC GCGCCGCGCG GATCTTCCGC TATTTCGGCG GCGAGGCGCT GCGGCTGCAC
GGCCGCAGCC TGGCGTCGGT GCGCCCGGGG CTGGAGGTGT CGACCCGGCA GGAGCCGCTG
GGCGTGGTCG GGCTGATCAC GCCGTGGAAC TTCCCGATCG CCATTCCGGC CTGGAAGACG
GCGCCCGCGC TGGCGTTCGG CAATGCCGTC GTCCTGAAGC CAGCCGGCAT CACGCCGGCC
ATCATTTCCG CCATGGCCGA CGCGCTCGAA GATGCCGGCC TGCCGCCGGG CCTGTTCAAC
CTGGTCTTCG CGCCGGGCAG CGTCGCCGGC CGGCTGATCG AGGATTCGCG GGTGGCGGCG
TTGTCCTTCA CTGGCTCGAC CGGGGTGGGA CGGCGGCTGG CGGTCGCCGC CGCCGAGCAT
GGCAAGCGCG TCCAGCTCGA AATGGGCGGC AAGAATCCGC TGGTGGTGCT GGACGACGCC
GATCTCGATC GCGCCGTCGC CATCGCCCTC GACGGCGCCT TCTTCGGCAG CGGCCAGCGC
TGCACGGCGT CGAGCCGCCT GATCGTCACC GACGGAATCC ACGACCGCTT CGTGGCGGCG
CTGACCGAAG CGGCGGCGAA GCTGCGCGTC GGCCATGCGC TCGACCCCGA TACGCAGATC
GGCCCGGTGG CGAGCGAGGA GCAGCGCGAC ACGATCGAGG CCTATCTGTC GATCGCCGTC
GAGCAGGGCG GCCGCATCGC CTGCGGCGGG GAGCGGCTGC GCCGACCGAC CGAGGGCTAT
TTCCTCGCGC CGGCACTGAT CACCGGCACC ACGGCCGAGA TGCGGGTGAA CCGGGAGGAG
ATTTTCGGCC CCGTCGCCAG CGTCGTGCGG GTGGCCGATT TCGACGAGGC GCTCGCGGTG
GCGAACGGCA GCGCGTTCGG GCTCTCGGCC GGCATCGTCA CCACCTCGCT TGCTCATGCC
GGCGCGTTCA GGGCACGGAC GCAGGCGGGG ATGGTGATGG TCAACGCGCC CACCGCCGGC
GTCGATTATC ATGTGCCCTT CGGCGGCACC AAGGCGAGCA GCATGGGACC GCGCGAGCAG
GGCTTCGCTG CCCAGGACTT CTACACCCGG ACCAAGACGG CCTACGTGAA CGCGTGA
 
Protein sequence
MSRLLPHRIG GERIAGPAAA ERRNPSDLSD LVATTPEGDD ALIDRAIAAA AAAQPGWAAR 
SPEARGDILD RAAALLIERA DDLGVLLARE EGKTCAEGRA EVVRAARIFR YFGGEALRLH
GRSLASVRPG LEVSTRQEPL GVVGLITPWN FPIAIPAWKT APALAFGNAV VLKPAGITPA
IISAMADALE DAGLPPGLFN LVFAPGSVAG RLIEDSRVAA LSFTGSTGVG RRLAVAAAEH
GKRVQLEMGG KNPLVVLDDA DLDRAVAIAL DGAFFGSGQR CTASSRLIVT DGIHDRFVAA
LTEAAAKLRV GHALDPDTQI GPVASEEQRD TIEAYLSIAV EQGGRIACGG ERLRRPTEGY
FLAPALITGT TAEMRVNREE IFGPVASVVR VADFDEALAV ANGSAFGLSA GIVTTSLAHA
GAFRARTQAG MVMVNAPTAG VDYHVPFGGT KASSMGPREQ GFAAQDFYTR TKTAYVNA