| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4936 |
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| Symbol | |
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| ID | 5194006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5544556 |
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| End bp | 5546028 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589421 |
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| Product | betaine aldehyde dehydrogenase |
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| Protein accession | YP_001270240 |
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| Protein GI | 148550138 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.208261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCGTT TCGGAACGCA AAAACTCTAC ATTGATGGCG CTTACGTCGA CGCTGGCAGC
GATGCCACGT TCGAAGCCAT CAACCCGGCT ACCGGCGAAG TCCTCGCCCA CGTGCAACGT
GCTACCGAGG CTGACGTCGA GAAAGCCGTC GAAAGCGCCG AGCGTGGCCA GAAAGTCTGG
GCTGCGATGA CTGCCATGCA GCGTTCGCGC ATCCTGCGCC GCGCCGTCGA CATCCTGCGC
GAGCGCAACG ACGAACTGGC CATGCTGGAA ACCCTGGACA CCGGCAAGTC GTACTCCGAA
ACCCGCTACG TCGACATCGT CACCGGCGCC GACGTGCTGG AATACTACGC AGGCCTGGTA
CCGGCCATCG AAGGCGAGCA GATCCCGCTG CGCGAATCGT CCTTCGTCTA CACCCGCCGC
GAGCCGCTGG GCGTAACCGT GGGTATCGGT GCCTGGAACT ACCCGATCCA GATCGCCCTG
TGGAAATCTG CCCCGGCCCT GGCCGCTGGC AACGCGATGA TCTTCAAACC GTCGGAAGTC
ACTTCGCTGA CCACCCTGAA ACTGGCCGAG ATCTACACCG AAGCCGGCCT GCCAAACGGC
GTGTTCAACG TTCTGACCGG CAGCGGCCGC GAAGTCGGCA CCTGGCTGAC CGAGCACCCA
CGCATCGAAA AGGTTTCGTT CACCGGCGGC ACCACCACCG GCAAGAAGGT CATGGCCAGC
GCCTCGAGCT CGTCGCTCAA GGAAGTCACC ATGGAACTGG GCGGCAAGTC GCCATTGATC
ATCTGCGCCG ACGCCGACCT GGACAAGGCC GCCGATATCG CCATGATGGC CAACTTCTAC
AGCTCGGGCC AGGTCTGCAC CAACGGCACC CGCGTGTTCA TCCCGGCTGA AATGAAGGCG
GCCTTCGAAG CCAAGATCGC CGAGCGCGTT GCCCGCATCC GCGTTGGCAA CCCGGAAGAC
GAAAACACCA ACTTCGGCCC GCTGGTCAGC TTCCAGCACA TGGAAAGCGT GCTGGGCTAC
ATCGCCAAGG GCAAGGAAGA AGGTGCCCGC GTGCTGTGCG GTGGCGAGCG CCTGACTGCC
GGTGACTTCG CCAAAGGTGC CTTCGTTGCG CCGACCGTGT TCACCGACTG CACCGACGAC
ATGACCATCG TCAAGGAAGA GATCTTCGGC CCGGTGATGA GCATCCTCAC CTACGAAACC
GAAGAAGAAG TGATCCGCCG TGCCAACGAC ACCGACTACG GCCTGGCCGC CGGCGTCTGC
ACCAACGACA TCACCCGCGC CCACCGCATC ATCCACAAGC TCGAAGCCGG TATCTGCTGG
ATCAACGCCT GGGGTGAATC GCCGGCCGAA ATGCCGGTAG GTGGCTACAA GCAGTCGGGC
GTCGGCCGTG AAAACGGCGT CAGCTCGCTG GCTCAATACA CTCGCATCAA GTCGGTCCAG
GTCGAGCTGG GCGGCTACAA CTCGGTTTTC TGA
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| Protein sequence | MARFGTQKLY IDGAYVDAGS DATFEAINPA TGEVLAHVQR ATEADVEKAV ESAERGQKVW
AAMTAMQRSR ILRRAVDILR ERNDELAMLE TLDTGKSYSE TRYVDIVTGA DVLEYYAGLV
PAIEGEQIPL RESSFVYTRR EPLGVTVGIG AWNYPIQIAL WKSAPALAAG NAMIFKPSEV
TSLTTLKLAE IYTEAGLPNG VFNVLTGSGR EVGTWLTEHP RIEKVSFTGG TTTGKKVMAS
ASSSSLKEVT MELGGKSPLI ICADADLDKA ADIAMMANFY SSGQVCTNGT RVFIPAEMKA
AFEAKIAERV ARIRVGNPED ENTNFGPLVS FQHMESVLGY IAKGKEEGAR VLCGGERLTA
GDFAKGAFVA PTVFTDCTDD MTIVKEEIFG PVMSILTYET EEEVIRRAND TDYGLAAGVC
TNDITRAHRI IHKLEAGICW INAWGESPAE MPVGGYKQSG VGRENGVSSL AQYTRIKSVQ
VELGGYNSVF
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