More than 300 homologs were found in PanDaTox collection
for query gene CA2559_01470 on replicon NC_014230
Organism: Croceibacter atlanticus HTCC2559



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014230  CA2559_01470  DNA-binding response regulator  100 
 
 		 217 aa  440  1e-123  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  35.02 
 
 		 215 aa  115  6e-25  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  34.09 
 
 		 220 aa  114  7.999999999999999e-25  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  32.55 
 
 		 213 aa  112  4.0000000000000004e-24  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  32.55 
 
 		 213 aa  112  4.0000000000000004e-24  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  33.64 
 
 		 216 aa  111  1.0000000000000001e-23  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  34.12 
 
 		 218 aa  110  1.0000000000000001e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  33.17 
 
 		 213 aa  110  1.0000000000000001e-23  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  32.98 
 
 		 206 aa  110  2.0000000000000002e-23  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  36.22 
 
 		 214 aa  110  2.0000000000000002e-23  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  36.22 
 
 		 214 aa  110  2.0000000000000002e-23  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  36.22 
 
 		 214 aa  110  2.0000000000000002e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_008609  Ppro_3163  two component LuxR family transcriptional regulator  33.51 
 
 		 203 aa  109  3e-23  Pelobacter propionicus DSM 2379  Bacteria  normal  0.932633  n/a   
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  36.22 
 
 		 214 aa  109  4.0000000000000004e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  32.42 
 
 		 213 aa  108  4.0000000000000004e-23  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  36.22 
 
 		 214 aa  109  4.0000000000000004e-23  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  36.22 
 
 		 214 aa  109  4.0000000000000004e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  31.78 
 
 		 221 aa  108  5e-23  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  34.93 
 
 		 212 aa  108  5e-23  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_009667  Oant_0443  two component LuxR family transcriptional regulator  33.82 
 
 		 213 aa  108  8.000000000000001e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  35.26 
 
 		 206 aa  107  1e-22  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  36.13 
 
 		 215 aa  107  1e-22  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  34.76 
 
 		 219 aa  107  1e-22  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  33.01 
 
 		 208 aa  106  2e-22  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  35.68 
 
 		 214 aa  106  3e-22  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.10411 
 
 
-
 
NC_008752  Aave_1121  two component LuxR family transcriptional regulator  31.41 
 
 		 222 aa  106  3e-22  Acidovorax citrulli AAC00-1  Bacteria  normal  0.864132  normal  0.872256 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  33.66 
 
 		 219 aa  105  4e-22  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  35.6 
 
 		 215 aa  105  5e-22  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  35.6 
 
 		 215 aa  105  5e-22  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  35.6 
 
 		 215 aa  105  5e-22  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  35.6 
 
 		 215 aa  105  5e-22  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  35.6 
 
 		 215 aa  105  5e-22  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  35.6 
 
 		 215 aa  105  6e-22  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  32.02 
 
 		 206 aa  105  6e-22  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  31.31 
 
 		 238 aa  103  1e-21  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  36.02 
 
 		 215 aa  103  1e-21  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  33.87 
 
 		 213 aa  103  2e-21  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_2635  two component transcriptional regulator, LuxR family  31.43 
 
 		 217 aa  103  2e-21  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000528497  hitchhiker  0.00476816 
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  33.68 
 
 		 206 aa  102  3e-21  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  34.34 
 
 		 215 aa  103  3e-21  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  32.04 
 
 		 211 aa  102  4e-21  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  31.98 
 
 		 220 aa  102  5e-21  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_013730  Slin_4823  two component transcriptional regulator, LuxR family  32.99 
 
 		 214 aa  101  7e-21  Spirosoma linguale DSM 74  Bacteria  normal  0.103693  normal  0.11387 
 
 
-
 
NC_008700  Sama_1873  response regulator receiver protein  32.86 
 
 		 215 aa  101  7e-21  Shewanella amazonensis SB2B  Bacteria  normal  0.56104  normal  1 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  32.23 
 
 		 214 aa  101  9e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  31.58 
 
 		 213 aa  101  9e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  30.19 
 
 		 213 aa  100  2e-20  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  33.87 
 
 		 213 aa  100  2e-20  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_011831  Cagg_3359  two component transcriptional regulator, LuxR family  33.16 
 
 		 219 aa  100  2e-20  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00321115  hitchhiker  0.000132937 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  31.31 
 
 		 223 aa  99.8  3e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_012854  Rleg_6399  two component transcriptional regulator, LuxR family  33.02 
 
 		 214 aa  99.4  4e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.139442 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  31.75 
 
 		 218 aa  99.4  4e-20  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  31.12 
 
 		 207 aa  99.4  4e-20  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  31.75 
 
 		 218 aa  99.4  4e-20  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  31.44 
 
 		 216 aa  99  4e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal  1 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  31.75 
 
 		 215 aa  99  5e-20  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  34 
 
 		 216 aa  99  5e-20  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  30.77 
 
 		 264 aa  99  5e-20  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  31.75 
 
 		 215 aa  99  5e-20  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  31.75 
 
 		 215 aa  99  5e-20  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  29.8 
 
 		 221 aa  99  5e-20  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  32.45 
 
 		 220 aa  98.6  7e-20  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_011368  Rleg2_4527  two component transcriptional regulator, LuxR family  33.17 
 
 		 223 aa  98.2  9e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.658241 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  31.75 
 
 		 218 aa  97.8  1e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  28.3 
 
 		 212 aa  96.7  2e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  29.29 
 
 		 222 aa  96.7  2e-19  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_007348  Reut_B4470  two component LuxR family transcriptional regulator  31.05 
 
 		 232 aa  97.1  2e-19  Ralstonia eutropha JMP134  Bacteria  normal  0.370568  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  32.65 
 
 		 214 aa  97.1  2e-19  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  30.05 
 
 		 232 aa  96.3  3e-19  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  33.16 
 
 		 214 aa  96.7  3e-19  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_013730  Slin_5975  two component transcriptional regulator, LuxR family  31.37 
 
 		 231 aa  96.3  3e-19  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.574546 
 
 
-
 
NC_008255  CHU_1317  response regulator  29.73 
 
 		 220 aa  95.9  4e-19  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  30.62 
 
 		 213 aa  95.9  4e-19  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  30.84 
 
 		 217 aa  95.9  5e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_009052  Sbal_1943  two component LuxR family transcriptional regulator  29.35 
 
 		 214 aa  95.5  5e-19  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  30.33 
 
 		 233 aa  95.5  5e-19  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_009092  Shew_0842  two component LuxR family transcriptional regulator  28.65 
 
 		 209 aa  95.5  5e-19  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00000336278  normal  1 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  30.52 
 
 		 232 aa  95.5  5e-19  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  30.48 
 
 		 215 aa  95.1  6e-19  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  30.99 
 
 		 232 aa  95.1  6e-19  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_008609  Ppro_2713  two component LuxR family transcriptional regulator  32.12 
 
 		 208 aa  95.5  6e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_12543  Transcriptional regulator  35.42 
 
 		 207 aa  95.1  8e-19  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.204025  n/a   
 
 
-
 
NC_007498  Pcar_1400  two component signal transduction response regulator  31.4 
 
 		 214 aa  94.7  8e-19  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_4664  two component LuxR family transcriptional regulator  30.88 
 
 		 219 aa  95.1  8e-19  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009565  TBFG_10861  nitrate/nitrite response transcriptional regulatory protein narL  30.26 
 
 		 216 aa  94.4  1e-18  Mycobacterium tuberculosis F11  Bacteria  normal  1  hitchhiker  0.000061441 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  29.95 
 
 		 211 aa  94.7  1e-18  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  31.41 
 
 		 217 aa  94  1e-18  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_2685  two component LuxR family transcriptional regulator  30.63 
 
 		 222 aa  94.4  1e-18  Caulobacter sp. K31  Bacteria  normal  0.120511  normal  1 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  31.09 
 
 		 224 aa  94.7  1e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  35.2 
 
 		 215 aa  94  1e-18  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  30.28 
 
 		 219 aa  94.4  1e-18  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  34.16 
 
 		 216 aa  93.6  2e-18  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  28.57 
 
 		 218 aa  93.6  2e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal  1 
 
 
-
 
NC_009708  YpsIP31758_3833  putative DNA-binding response regulator EsrB  29.5 
 
 		 210 aa  94  2e-18  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_3278  two component LuxR family transcriptional regulator  31.05 
 
 		 214 aa  94  2e-18  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.749326 
 
 
-
 
NC_010159  YpAngola_A3945  putative DNA-binding response regulator EsrB  29.5 
 
 		 210 aa  93.6  2e-18  Yersinia pestis Angola  Bacteria  normal  0.0480381  normal  1 
 
 
-
 
NC_013132  Cpin_5915  two component transcriptional regulator, LuxR family  32.29 
 
 		 207 aa  94  2e-18  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00974735  normal  1 
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  29.65 
 
 		 228 aa  93.6  2e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_5387  two component transcriptional regulator, LuxR family  31.28 
 
 		 215 aa  93.6  2e-18  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007952  Bxe_B0788  two component LuxR family transcriptional regulator  32.21 
 
 		 218 aa  93.6  2e-18  Burkholderia xenovorans LB400  Bacteria  normal  0.3296  normal  1 
 
 
-
 
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