More than 300 homologs were found in PanDaTox collection
for query gene Slin_5975 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013730  Slin_5975  two component transcriptional regulator, LuxR family  100 
 
 		 231 aa  477  1e-134  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.574546 
 
 
-
 
NC_014230  CA2559_01470  DNA-binding response regulator  31.37 
 
 		 217 aa  96.3  4e-19  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3186  two component LuxR family transcriptional regulator  26.67 
 
 		 215 aa  95.1  8e-19  Opitutus terrae PB90-1  Bacteria  normal  0.0678517  normal  1 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  27.45 
 
 		 218 aa  94.4  1e-18  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6057  two component transcriptional regulator, LuxR family  26.79 
 
 		 217 aa  87.8  1e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  27.59 
 
 		 219 aa  88.2  1e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  28.11 
 
 		 216 aa  87  2e-16  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  27.49 
 
 		 206 aa  87  2e-16  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_010625  Bphy_7047  two component LuxR family transcriptional regulator  25.67 
 
 		 215 aa  86.7  3e-16  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.976007 
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  27.78 
 
 		 212 aa  85.1  7e-16  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  27.57 
 
 		 216 aa  84.7  0.000000000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  25.73 
 
 		 216 aa  84.3  0.000000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.657091 
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  26.78 
 
 		 233 aa  84.7  0.000000000000001  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  25 
 
 		 219 aa  84.3  0.000000000000001  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  28.64 
 
 		 214 aa  83.2  0.000000000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  29.26 
 
 		 212 aa  82.8  0.000000000000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  26.26 
 
 		 221 aa  82.8  0.000000000000004  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  27.37 
 
 		 215 aa  82.4  0.000000000000005  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_013131  Caci_6044  two component transcriptional regulator, LuxR family  29.12 
 
 		 226 aa  82.8  0.000000000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014211  Ndas_5233  two component transcriptional regulator, LuxR family  27.62 
 
 		 223 aa  82  0.000000000000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.114456  hitchhiker  0.000738291 
 
 
-
 
NC_013739  Cwoe_1651  two component transcriptional regulator, LuxR family  27.7 
 
 		 227 aa  82  0.000000000000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.705317  normal  0.304873 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  24.52 
 
 		 219 aa  82  0.000000000000008  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  24.52 
 
 		 219 aa  81.3  0.00000000000001  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_007517  Gmet_2158  two component LuxR family transcriptional regulator  27.8 
 
 		 210 aa  80.9  0.00000000000001  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0301144 
 
 
-
 
NC_013510  Tcur_4226  two component transcriptional regulator, LuxR family  25.98 
 
 		 210 aa  81.3  0.00000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  27.32 
 
 		 218 aa  81.3  0.00000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  25.79 
 
 		 216 aa  81.6  0.00000000000001  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_7055  two component transcriptional regulator, LuxR family  26.44 
 
 		 219 aa  80.9  0.00000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  25.98 
 
 		 215 aa  80.5  0.00000000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_010571  Oter_3357  two component LuxR family transcriptional regulator  30.22 
 
 		 238 aa  80.5  0.00000000000002  Opitutus terrae PB90-1  Bacteria  normal  0.1255  normal  1 
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  25.98 
 
 		 215 aa  80.5  0.00000000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  29.19 
 
 		 216 aa  80.5  0.00000000000002  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  25.49 
 
 		 215 aa  80.9  0.00000000000002  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_008609  Ppro_3163  two component LuxR family transcriptional regulator  30.95 
 
 		 203 aa  80.5  0.00000000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.932633  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  23.67 
 
 		 212 aa  80.5  0.00000000000002  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  25.98 
 
 		 215 aa  80.5  0.00000000000002  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  24.39 
 
 		 216 aa  79.7  0.00000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008255  CHU_1317  response regulator  26.03 
 
 		 220 aa  79.3  0.00000000000005  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_014148  Plim_3764  response regulator receiver  28.49 
 
 		 217 aa  79  0.00000000000006  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.321181  n/a   
 
 
-
 
NC_010625  Bphy_5813  two component LuxR family transcriptional regulator  25.82 
 
 		 215 aa  78.6  0.00000000000007  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.118405 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  25.27 
 
 		 213 aa  78.6  0.00000000000008  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  24.75 
 
 		 206 aa  78.2  0.0000000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006349  BMAA0703  LuxR family DNA-binding response regulator  24.02 
 
 		 215 aa  77.8  0.0000000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  0.533722  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1154  LuxR family DNA-binding response regulator  24.02 
 
 		 215 aa  77.8  0.0000000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.324728  n/a   
 
 
-
 
NC_007650  BTH_II1570  LuxR family DNA-binding response regulator  24.02 
 
 		 215 aa  77.8  0.0000000000001  Burkholderia thailandensis E264  Bacteria  normal  0.17909  n/a   
 
 
-
 
NC_009079  BMA10247_A1725  LuxR family DNA-binding response regulator  24.02 
 
 		 215 aa  77.8  0.0000000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  25.96 
 
 		 215 aa  77.8  0.0000000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_008835  BMA10229_0760  LuxR family DNA-binding response regulator  24.02 
 
 		 215 aa  77.8  0.0000000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1228  LuxR family DNA-binding response regulator  24.02 
 
 		 215 aa  77.8  0.0000000000001  Burkholderia pseudomallei 668  Bacteria  normal  0.0904383  n/a   
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  27.18 
 
 		 215 aa  77  0.0000000000002  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2427  LuxR family DNA-binding response regulator  24.02 
 
 		 282 aa  77  0.0000000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  25.98 
 
 		 228 aa  77.4  0.0000000000002  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  26.67 
 
 		 228 aa  77.4  0.0000000000002  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal  1 
 
 
-
 
NC_013730  Slin_6441  two component transcriptional regulator, LuxR family  27.18 
 
 		 213 aa  77  0.0000000000002  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  24.02 
 
 		 215 aa  77  0.0000000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  27.22 
 
 		 212 aa  76.6  0.0000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  22.55 
 
 		 218 aa  76.6  0.0000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  26.34 
 
 		 217 aa  76.3  0.0000000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  29.5 
 
 		 221 aa  76.3  0.0000000000004  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_012854  Rleg_6399  two component transcriptional regulator, LuxR family  25.7 
 
 		 214 aa  76.3  0.0000000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.139442 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  25.49 
 
 		 216 aa  76.3  0.0000000000004  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  26.11 
 
 		 214 aa  76.3  0.0000000000004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  28.31 
 
 		 237 aa  75.9  0.0000000000005  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_007908  Rfer_1539  two component LuxR family transcriptional regulator  21.08 
 
 		 230 aa  75.9  0.0000000000005  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_2014  two component transcriptional regulator, LuxR family  25.62 
 
 		 212 aa  75.9  0.0000000000005  Nakamurella multipartita DSM 44233  Bacteria  normal  0.172206  hitchhiker  0.00394331 
 
 
-
 
NC_008009  Acid345_4067  two component LuxR family transcriptional regulator  27.14 
 
 		 233 aa  75.9  0.0000000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.836498  normal  0.141664 
 
 
-
 
NC_013739  Cwoe_0163  two component transcriptional regulator, LuxR family  27.23 
 
 		 213 aa  75.5  0.0000000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.107009  normal  1 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  25.27 
 
 		 214 aa  75.5  0.0000000000007  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  27.49 
 
 		 232 aa  75.1  0.0000000000008  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_6596  two component LuxR family transcriptional regulator  23.58 
 
 		 249 aa  75.1  0.0000000000008  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  27.49 
 
 		 232 aa  75.1  0.0000000000009  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_013522  Taci_0801  two component transcriptional regulator, LuxR family  26.87 
 
 		 227 aa  75.1  0.0000000000009  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  24.73 
 
 		 213 aa  75.1  0.0000000000009  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  30.73 
 
 		 207 aa  75.1  0.0000000000009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  25.49 
 
 		 208 aa  75.1  0.0000000000009  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  27.54 
 
 		 250 aa  74.7  0.000000000001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_010086  Bmul_4256  two component LuxR family transcriptional regulator  23.53 
 
 		 215 aa  74.3  0.000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.282152  normal  1 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  27.17 
 
 		 228 aa  74.7  0.000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  26.96 
 
 		 216 aa  74.7  0.000000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  25.93 
 
 		 224 aa  74.3  0.000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  25.41 
 
 		 222 aa  73.6  0.000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  28.1 
 
 		 238 aa  73.9  0.000000000002  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  25.68 
 
 		 207 aa  73.9  0.000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_4976  two component transcriptional regulator, LuxR family  28.07 
 
 		 218 aa  73.9  0.000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.289575  normal  0.034027 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  26.9 
 
 		 215 aa  74.3  0.000000000002  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_0656  two component transcriptional regulator, LuxR family  28.04 
 
 		 218 aa  73.6  0.000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.214241 
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  28.21 
 
 		 218 aa  73.2  0.000000000003  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_5989  two component LuxR family transcriptional regulator  23.53 
 
 		 215 aa  73.2  0.000000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007511  Bcep18194_B1652  two component LuxR family transcriptional regulator  23.53 
 
 		 215 aa  73.2  0.000000000003  Burkholderia sp. 383  Bacteria  normal  0.187578  normal  0.308689 
 
 
-
 
NC_010552  BamMC406_4248  two component LuxR family transcriptional regulator  23.53 
 
 		 215 aa  73.2  0.000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.206342  normal  1 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  25.24 
 
 		 217 aa  73.2  0.000000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_014148  Plim_2876  response regulator receiver  25.13 
 
 		 284 aa  73.2  0.000000000003  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0816  two component LuxR family transcriptional regulator  26.6 
 
 		 212 aa  73.6  0.000000000003  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.0000419268  normal  1 
 
 
-
 
NC_014230  CA2559_06590  DNA-binding response regulator, LuxR family protein  23.65 
 
 		 210 aa  73.2  0.000000000003  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_008391  Bamb_3774  two component LuxR family transcriptional regulator  23.53 
 
 		 215 aa  73.2  0.000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.329832 
 
 
-
 
NC_008543  Bcen2424_4365  two component LuxR family transcriptional regulator  23.53 
 
 		 215 aa  73.2  0.000000000003  Burkholderia cenocepacia HI2424  Bacteria  normal  0.902614  normal  1 
 
 
-
 
NC_011368  Rleg2_4527  two component transcriptional regulator, LuxR family  25.14 
 
 		 223 aa  73.2  0.000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.658241 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  26.83 
 
 		 231 aa  73.2  0.000000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  25.37 
 
 		 218 aa  72.8  0.000000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_4067  two component LuxR family transcriptional regulator  29.23 
 
 		 209 aa  73.2  0.000000000004  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
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