More than 300 homologs were found in PanDaTox collection
for query gene Tbd_1562 on replicon NC_007404
Organism: Thiobacillus denitrificans ATCC 25259



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007404  Tbd_1562  putative hydrolase  100 
 
 		 218 aa  440  1e-123  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.320439  normal  0.240105 
 
 
-
 
NC_010681  Bphyt_2920  HAD-superfamily hydrolase, subfamily IA, variant 1  57.41 
 
 		 219 aa  242  1.9999999999999999e-63  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00300829  normal  1 
 
 
-
 
NC_007951  Bxe_A1064  putative haloacid dehalogenase-like hydrolase  56.94 
 
 		 219 aa  238  6.999999999999999e-62  Burkholderia xenovorans LB400  Bacteria  normal  0.259823  normal  1 
 
 
-
 
NC_010622  Bphy_0820  HAD family hydrolase  57.41 
 
 		 219 aa  236  1e-61  Burkholderia phymatum STM815  Bacteria  normal  0.362734  normal  1 
 
 
-
 
NC_007973  Rmet_2438  HAD family hydrolase  56.48 
 
 		 219 aa  236  3e-61  Cupriavidus metallidurans CH34  Bacteria  normal  0.625372  normal  1 
 
 
-
 
NC_007347  Reut_A2273  HAD family hydrolase  56.48 
 
 		 219 aa  235  5.0000000000000005e-61  Ralstonia eutropha JMP134  Bacteria  normal  0.768763  n/a   
 
 
-
 
NC_011662  Tmz1t_2434  HAD-superfamily hydrolase, subfamily IA, variant 1  55.5 
 
 		 218 aa  228  4e-59  Thauera sp. MZ1T  Bacteria  normal  0.282448  n/a   
 
 
-
 
NC_010524  Lcho_0590  HAD family hydrolase  53.77 
 
 		 219 aa  228  5e-59  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0419315 
 
 
-
 
NC_003295  RSc1042  putative phosphoglycolate phosphatase protein  57.67 
 
 		 219 aa  218  7e-56  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0803838  normal  1 
 
 
-
 
NC_010551  BamMC406_0993  HAD family hydrolase  56.94 
 
 		 222 aa  216  2e-55  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008390  Bamb_0989  HAD family hydrolase  56.94 
 
 		 222 aa  216  2e-55  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A0658  haloacid dehalogenase-like hydrolase  51.61 
 
 		 222 aa  216  2.9999999999999998e-55  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.40238 
 
 
-
 
NC_007947  Mfla_1323  HAD family hydrolase  49.54 
 
 		 218 aa  212  2.9999999999999995e-54  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00010916  normal  0.934661 
 
 
-
 
NC_008060  Bcen_0633  HAD family hydrolase  56.94 
 
 		 219 aa  211  7.999999999999999e-54  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.32289  n/a   
 
 
-
 
NC_008542  Bcen2424_1113  HAD family hydrolase  56.94 
 
 		 219 aa  211  7.999999999999999e-54  Burkholderia cenocepacia HI2424  Bacteria  normal  0.970841  n/a   
 
 
-
 
NC_010508  Bcenmc03_1071  HAD family hydrolase  58.02 
 
 		 219 aa  210  1e-53  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.357132  normal  0.149129 
 
 
-
 
NC_007510  Bcep18194_A4225  phosphatase-like  56.94 
 
 		 219 aa  207  7e-53  Burkholderia sp. 383  Bacteria  normal  0.559723  normal  1 
 
 
-
 
NC_012856  Rpic12D_0972  HAD-superfamily hydrolase, subfamily IA, variant 1  53.42 
 
 		 219 aa  206  2e-52  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.0569787 
 
 
-
 
NC_010682  Rpic_0907  HAD-superfamily hydrolase, subfamily IA, variant 1  53.42 
 
 		 219 aa  206  2e-52  Ralstonia pickettii 12J  Bacteria  normal  0.0464753  normal  0.0304334 
 
 
-
 
NC_010084  Bmul_2191  HAD family hydrolase  55.71 
 
 		 219 aa  204  7e-52  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.0671825 
 
 
-
 
NC_007651  BTH_I1709  haloacid dehalogenase-like hydrolase  53.7 
 
 		 222 aa  202  3e-51  Burkholderia thailandensis E264  Bacteria  normal  0.0748768  n/a   
 
 
-
 
NC_009074  BURPS668_2800  HAD superfamily hydrolase  53.7 
 
 		 219 aa  201  5e-51  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.00584417  n/a   
 
 
-
 
NC_009076  BURPS1106A_2861  HAD superfamily hydrolase  53.7 
 
 		 219 aa  201  5e-51  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0565933  n/a   
 
 
-
 
NC_007434  BURPS1710b_2916  haloacid dehalogenase-like hydrolase  53.7 
 
 		 237 aa  201  5e-51  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0271792  n/a   
 
 
-
 
NC_010506  Swoo_2034  HAD family hydrolase  46.01 
 
 		 216 aa  198  5e-50  Shewanella woodyi ATCC 51908  Bacteria  normal  0.645104  normal  0.0672621 
 
 
-
 
NC_011901  Tgr7_1355  HAD-superfamily hydrolase, subfamily IA, variant 1  50.23 
 
 		 228 aa  197  1.0000000000000001e-49  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.873579  n/a   
 
 
-
 
NC_007948  Bpro_3658  HAD family hydrolase  46.98 
 
 		 219 aa  195  5.000000000000001e-49  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_2632  HAD family hydrolase  44.88 
 
 		 216 aa  192  3e-48  Shewanella sediminis HAW-EB3  Bacteria  normal  0.861911  hitchhiker  0.000131082 
 
 
-
 
NC_008782  Ajs_3288  HAD family hydrolase  47 
 
 		 222 aa  192  4e-48  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_2641  HAD-superfamily hydrolase, subfamily IA, variant 1  47 
 
 		 222 aa  192  4e-48  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_5280  HAD family hydrolase  47.17 
 
 		 228 aa  189  4e-47  Delftia acidovorans SPH-1  Bacteria  normal  0.94241  normal  1 
 
 
-
 
NC_012791  Vapar_1380  HAD-superfamily hydrolase, subfamily IA, variant 1  50.7 
 
 		 223 aa  187  1e-46  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_1722  HAD family hydrolase  46.3 
 
 		 228 aa  187  1e-46  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_1709  HAD family hydrolase  44.26 
 
 		 238 aa  186  2e-46  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000621435  n/a   
 
 
-
 
NC_008786  Veis_4786  HAD family hydrolase  47.89 
 
 		 225 aa  186  2e-46  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.480444 
 
 
-
 
NC_009438  Sputcn32_1575  HAD family hydrolase  43.4 
 
 		 238 aa  186  3e-46  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.000310395  n/a   
 
 
-
 
NC_009052  Sbal_1712  HAD family hydrolase  44.07 
 
 		 239 aa  185  4e-46  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000000827821  n/a   
 
 
-
 
NC_011663  Sbal223_2655  HAD-superfamily hydrolase, subfamily IA, variant 3  44.07 
 
 		 239 aa  185  5e-46  Shewanella baltica OS223  Bacteria  normal  0.019501  hitchhiker  0.000128755 
 
 
-
 
NC_009997  Sbal195_1752  HAD family hydrolase  44.26 
 
 		 238 aa  185  5e-46  Shewanella baltica OS195  Bacteria  hitchhiker  0.00000718269  normal  0.2896 
 
 
-
 
NC_008781  Pnap_3084  HAD family hydrolase  46.51 
 
 		 219 aa  184  9e-46  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009379  Pnuc_0391  HAD family hydrolase  43.26 
 
 		 229 aa  182  4.0000000000000006e-45  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_1175  HAD family hydrolase  44.44 
 
 		 222 aa  181  6e-45  Acidovorax citrulli AAC00-1  Bacteria  normal  0.341694  normal  1 
 
 
-
 
NC_007484  Noc_0178  HAD family hydrolase  44.13 
 
 		 230 aa  178  4.999999999999999e-44  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.000756614  n/a   
 
 
-
 
NC_008577  Shewana3_2565  HAD family hydrolase  41.03 
 
 		 244 aa  178  4.999999999999999e-44  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00000244874  normal  1 
 
 
-
 
NC_008345  Sfri_1492  HAD family hydrolase  43.46 
 
 		 217 aa  178  5.999999999999999e-44  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.210059  n/a   
 
 
-
 
NC_007005  Psyr_1640  HAD family hydrolase  42.92 
 
 		 220 aa  178  7e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.284861 
 
 
-
 
NC_010531  Pnec_0398  HAD-superfamily hydrolase, subfamily IA, variant 1  42.79 
 
 		 226 aa  178  7e-44  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_2403  HAD family hydrolase  41.45 
 
 		 248 aa  177  1e-43  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000854479  normal  1 
 
 
-
 
NC_008700  Sama_1987  HAD family hydrolase  45.81 
 
 		 215 aa  176  2e-43  Shewanella amazonensis SB2B  Bacteria  normal  0.0143235  normal  0.0109237 
 
 
-
 
NC_009092  Shew_1595  HAD family hydrolase  44.55 
 
 		 219 aa  176  3e-43  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00389314  normal  0.0112895 
 
 
-
 
NC_008322  Shewmr7_2473  HAD family hydrolase  41.45 
 
 		 248 aa  174  8e-43  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000591891  hitchhiker  0.00615598 
 
 
-
 
NC_009656  PSPA7_2187  putative hydrolase  44.44 
 
 		 230 aa  171  9e-42  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0143931  n/a   
 
 
-
 
NC_010322  PputGB1_1483  HAD family hydrolase  42.15 
 
 		 224 aa  171  9e-42  Pseudomonas putida GB-1  Bacteria  normal  0.0762089  normal  1 
 
 
-
 
NC_008463  PA14_25590  putative hydrolase  44.65 
 
 		 230 aa  170  1e-41  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.080664  normal  1 
 
 
-
 
NC_007963  Csal_1594  HAD family hydrolase  45.63 
 
 		 234 aa  170  2e-41  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.109016  n/a   
 
 
-
 
NC_009439  Pmen_1621  HAD family hydrolase  43.5 
 
 		 231 aa  170  2e-41  Pseudomonas mendocina ymp  Bacteria  normal  0.0638141  normal  1 
 
 
-
 
NC_013422  Hneap_1758  HAD-superfamily hydrolase, subfamily IA, variant 1  45.23 
 
 		 234 aa  169  3e-41  Halothiobacillus neapolitanus c2  Bacteria  normal  0.0639278  n/a   
 
 
-
 
NC_004578  PSPTO_3839  HAD-superfamily hydrolase  43.52 
 
 		 220 aa  169  4e-41  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0865807  n/a   
 
 
-
 
NC_010501  PputW619_1518  HAD family hydrolase  42.15 
 
 		 226 aa  167  8e-41  Pseudomonas putida W619  Bacteria  hitchhiker  0.0020263  normal  1 
 
 
-
 
NC_002947  PP_1907  HAD superfamily hydrolase  41.26 
 
 		 224 aa  167  1e-40  Pseudomonas putida KT2440  Bacteria  normal  1  unclonable  0.00000027861 
 
 
-
 
NC_009512  Pput_3807  HAD family hydrolase  41.26 
 
 		 224 aa  167  1e-40  Pseudomonas putida F1  Bacteria  normal  0.118188  normal  1 
 
 
-
 
NC_007954  Sden_2300  HAD family hydrolase  42.79 
 
 		 215 aa  167  1e-40  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000000835779  n/a   
 
 
-
 
NC_009654  Mmwyl1_2240  HAD family hydrolase  41.58 
 
 		 214 aa  164  5.9999999999999996e-40  Marinomonas sp. MWYL1  Bacteria  normal  0.279618  normal  0.937061 
 
 
-
 
NC_008740  Maqu_1874  HAD family hydrolase  41.46 
 
 		 216 aa  159  4e-38  Marinobacter aquaeolei VT8  Bacteria  normal  0.785736  n/a   
 
 
-
 
NC_003910  CPS_2291  HAD family hydrolase  40.76 
 
 		 218 aa  156  2e-37  Colwellia psychrerythraea 34H  Bacteria  normal  0.265516  n/a   
 
 
-
 
NC_007912  Sde_1621  TatD-related deoxyribonuclease  38.46 
 
 		 214 aa  155  4e-37  Saccharophagus degradans 2-40  Bacteria  normal  0.0243824  normal  1 
 
 
-
 
NC_012560  Avin_14840  HAD-superfamily hydrolase  41.04 
 
 		 220 aa  154  7e-37  Azotobacter vinelandii DJ  Bacteria  normal  0.770171  n/a   
 
 
-
 
NC_009901  Spea_2502  HAD family hydrolase  42.33 
 
 		 200 aa  153  2e-36  Shewanella pealeana ATCC 700345  Bacteria  normal  0.396303  n/a   
 
 
-
 
NC_011138  MADE_02338  putative phosphoglycolate phosphatase, contains a phosphatase-like domain  40.09 
 
 		 234 aa  149  2e-35  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0463297  n/a   
 
 
-
 
NC_008709  Ping_2206  HAD family hydrolase  39.41 
 
 		 227 aa  149  3e-35  Psychromonas ingrahamii 37  Bacteria  normal  0.0834963  normal  0.088242 
 
 
-
 
NC_012912  Dd1591_0072  HAD-superfamily hydrolase, subfamily IA, variant 3  41.9 
 
 		 230 aa  143  2e-33  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_4164  HAD family hydrolase  40.54 
 
 		 193 aa  142  3e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0540485  normal  0.889807 
 
 
-
 
NC_013889  TK90_1192  HAD-superfamily hydrolase, subfamily IA, variant 1  41.43 
 
 		 232 aa  142  4e-33  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.998223  normal  0.137923 
 
 
-
 
NC_009511  Swit_2711  HAD family hydrolase  41.97 
 
 		 230 aa  142  5e-33  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006369  lpl2213  hypothetical protein  33.64 
 
 		 219 aa  138  6e-32  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009524  PsycPRwf_0481  HAD family hydrolase  37.93 
 
 		 231 aa  138  7e-32  Psychrobacter sp. PRwf-1  Bacteria  normal  0.158536  normal  1 
 
 
-
 
NC_006368  lpp2241  hypothetical protein  33.18 
 
 		 219 aa  136  2e-31  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010725  Mpop_0356  HAD-superfamily hydrolase, subfamily IA, variant 1  40.31 
 
 		 233 aa  137  2e-31  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007794  Saro_2839  HAD family hydrolase  41.12 
 
 		 218 aa  135  7.000000000000001e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0722376  n/a   
 
 
-
 
NC_011894  Mnod_7122  HAD-superfamily hydrolase, subfamily IA, variant 1  40.47 
 
 		 219 aa  134  7.000000000000001e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007204  Psyc_0258  phosphoglycolate phosphatase  36 
 
 		 235 aa  134  9.999999999999999e-31  Psychrobacter arcticus 273-4  Bacteria  normal  0.691366  normal  1 
 
 
-
 
NC_010172  Mext_0280  HAD family hydrolase  37.68 
 
 		 233 aa  134  9.999999999999999e-31  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_0323  HAD-superfamily hydrolase, subfamily IA, variant 1  37.68 
 
 		 233 aa  133  1.9999999999999998e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.0341719 
 
 
-
 
NC_009952  Dshi_0316  phosphoglycolate phosphatase  41.71 
 
 		 226 aa  133  3e-30  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.547041 
 
 
-
 
NC_007969  Pcryo_0284  HAD family hydrolase  35.82 
 
 		 234 aa  130  2.0000000000000002e-29  Psychrobacter cryohalolentis K5  Bacteria  normal  1  normal  0.251372 
 
 
-
 
NC_011761  AFE_2218  HAD-superfamily hydrolase, subfamily IA  40.47 
 
 		 227 aa  128  7.000000000000001e-29  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_1872  HAD-superfamily hydrolase, subfamily IA, variant 3  40.47 
 
 		 227 aa  128  7.000000000000001e-29  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.117122  normal  1 
 
 
-
 
NC_007643  Rru_A2658  haloacid dehalogenase-like hydrolase  37.56 
 
 		 236 aa  128  7.000000000000001e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_1778  HAD family hydrolase  39.69 
 
 		 222 aa  126  2.0000000000000002e-28  Magnetococcus sp. MC-1  Bacteria  normal  0.0979226  decreased coverage  0.0000822361 
 
 
-
 
NC_011989  Avi_2262  hydrolase  37.79 
 
 		 223 aa  126  2.0000000000000002e-28  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007802  Jann_0625  HAD family hydrolase  40.7 
 
 		 221 aa  125  3e-28  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_6369  HAD family hydrolase  38.07 
 
 		 219 aa  125  5e-28  Methylobacterium sp. 4-46  Bacteria  normal  0.23133  normal  0.167912 
 
 
-
 
NC_008044  TM1040_0292  HAD family hydrolase  40.8 
 
 		 222 aa  124  8.000000000000001e-28  Ruegeria sp. TM1040  Bacteria  normal  0.402537  normal  0.982934 
 
 
-
 
NC_009972  Haur_0384  HAD family hydrolase  37.96 
 
 		 222 aa  124  2e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.0000045535  n/a   
 
 
-
 
NC_009720  Xaut_4762  HAD family hydrolase  36.92 
 
 		 242 aa  120  1.9999999999999998e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  0.698376  hitchhiker  0.00269567 
 
 
-
 
NC_010581  Bind_1313  HAD family hydrolase  37.38 
 
 		 232 aa  115  3.9999999999999997e-25  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.95229 
 
 
-
 
NC_010505  Mrad2831_0854  HAD family hydrolase  38.07 
 
 		 221 aa  115  3.9999999999999997e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.249022  decreased coverage  0.000200034 
 
 
-
 
NC_007520  Tcr_0705  HAD family hydrolase  34.63 
 
 		 214 aa  115  5e-25  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.399525  n/a   
 
 
-
 
NC_009719  Plav_2768  HAD family hydrolase  38.6 
 
 		 237 aa  114  7.999999999999999e-25  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.654297  normal  0.45248 
 
 
-
 
NC_011666  Msil_2100  HAD-superfamily hydrolase, subfamily IA, variant 1  36.67 
 
 		 215 aa  114  1.0000000000000001e-24  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
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