More than 300 homologs were found in PanDaTox collection
for query gene Rmet_5306 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007348  Reut_B5868  methyl-accepting chemotaxis sensory transducer  67.23 
 
 
541 aa  655    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  65 
 
 
585 aa  637    Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  100 
 
 
565 aa  1115    Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  63.94 
 
 
520 aa  626  1e-178  Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
NC_012856  Rpic12D_1771  methyl-accepting chemotaxis sensory transducer  63.74 
 
 
520 aa  623  1e-177  Ralstonia pickettii 12D  Bacteria  normal  normal  0.841752 
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  63.37 
 
 
587 aa  617  1e-175  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1523  methyl-accepting chemotaxis sensory transducer  62.6 
 
 
539 aa  598  1e-169  Burkholderia sp. 383  Bacteria  normal  normal  0.377846 
 
 
-
 
NC_010552  BamMC406_4332  methyl-accepting chemotaxis sensory transducer  62.19 
 
 
545 aa  588  1e-167  Burkholderia ambifaria MC40-6  Bacteria  normal  0.167851  normal 
 
 
-
 
NC_010515  Bcenmc03_5865  methyl-accepting chemotaxis sensory transducer  62.9 
 
 
539 aa  588  1e-166  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.439663  normal 
 
 
-
 
NC_008061  Bcen_3926  methyl-accepting chemotaxis sensory transducer  63.76 
 
 
539 aa  587  1e-166  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.279293  n/a   
 
 
-
 
NC_008543  Bcen2424_4440  methyl-accepting chemotaxis sensory transducer  63.76 
 
 
539 aa  587  1e-166  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6645  methyl-accepting chemotaxis sensory transducer  55.49 
 
 
583 aa  538  1e-151  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.983597 
 
 
-
 
NC_007434  BURPS1710b_2139  methyl-accepting chemotaxis protein  57.51 
 
 
616 aa  524  1e-147  Burkholderia pseudomallei 1710b  Bacteria  normal  0.942679  n/a   
 
 
-
 
NC_009076  BURPS1106A_2002  methyl-accepting chemotaxis protein  58.29 
 
 
580 aa  517  1.0000000000000001e-145  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA1130  methyl-accepting chemotaxis protein  58.29 
 
 
580 aa  517  1.0000000000000001e-145  Burkholderia mallei ATCC 23344  Bacteria  normal  0.306094  n/a   
 
 
-
 
NC_007651  BTH_I2374  methyl-accepting chemotaxis protein  57.88 
 
 
586 aa  516  1.0000000000000001e-145  Burkholderia thailandensis E264  Bacteria  normal  0.205822  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1571  methyl-accepting chemotaxis protein  58.29 
 
 
580 aa  517  1.0000000000000001e-145  Burkholderia mallei SAVP1  Bacteria  normal  0.295886  n/a   
 
 
-
 
NC_009080  BMA10247_0927  methyl-accepting chemotaxis protein  58.29 
 
 
580 aa  517  1.0000000000000001e-145  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0232  methyl-accepting chemotaxis protein  58.29 
 
 
580 aa  517  1.0000000000000001e-145  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1983  methyl-accepting chemotaxis protein  58.29 
 
 
580 aa  512  1e-144  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4184  methyl-accepting chemotaxis sensory transducer  61.95 
 
 
493 aa  508  1e-143  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6305  methyl-accepting chemotaxis sensory transducer  54.1 
 
 
528 aa  493  9.999999999999999e-139  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_6464  methyl-accepting chemotaxis sensory transducer  53.9 
 
 
528 aa  491  1e-137  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6699  methyl-accepting chemotaxis sensory transducer  53.9 
 
 
528 aa  491  1e-137  Burkholderia cenocepacia HI2424  Bacteria  normal  0.971949  normal  0.6752 
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  51.14 
 
 
618 aa  481  1e-134  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_010002  Daci_0742  methyl-accepting chemotaxis sensory transducer  48.98 
 
 
581 aa  453  1.0000000000000001e-126  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  50.38 
 
 
520 aa  451  1e-125  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  48.37 
 
 
547 aa  449  1e-125  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_003295  RSc1894  methyl-accepting chemotaxis transducer transmembrane protein  50 
 
 
535 aa  445  1e-123  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0710104  normal  0.94486 
 
 
-
 
NC_007336  Reut_C6240  chemotaxis sensory transducer  46.86 
 
 
556 aa  437  1e-121  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  49.52 
 
 
525 aa  431  1e-119  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_008826  Mpe_B0133  methyl-accepting chemotaxis protein  50.2 
 
 
526 aa  412  1e-114  Methylibium petroleiphilum PM1  Bacteria  normal  0.845076  hitchhiker  0.000223015 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  46.02 
 
 
539 aa  409  1e-113  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_003295  RSc1950  methyl-accepting chemotaxis transducer transmembrane protein  62.54 
 
 
329 aa  375  1e-102  Ralstonia solanacearum GMI1000  Bacteria  normal  0.265012  normal  0.886741 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  47.07 
 
 
559 aa  364  3e-99  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  45.71 
 
 
586 aa  362  9e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007650  BTH_II1955  methyl-accepting chemotaxis protein  70.39 
 
 
685 aa  358  9.999999999999999e-98  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  46.59 
 
 
572 aa  358  1.9999999999999998e-97  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  42.78 
 
 
578 aa  358  1.9999999999999998e-97  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  46.98 
 
 
549 aa  356  5e-97  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_009078  BURPS1106A_A0627  methyl-accepting chemotaxis protein  70.39 
 
 
616 aa  353  2.9999999999999997e-96  Burkholderia pseudomallei 1106a  Bacteria  normal  0.202062  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2013  methyl-accepting chemotaxis protein  70.39 
 
 
634 aa  353  2.9999999999999997e-96  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  42.78 
 
 
580 aa  354  2.9999999999999997e-96  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A0719  methyl-accepting chemotaxis protein  70.39 
 
 
616 aa  353  4e-96  Burkholderia pseudomallei 668  Bacteria  normal  0.152122  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
592 aa  346  7e-94  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  51.49 
 
 
580 aa  345  1e-93  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  53.28 
 
 
559 aa  344  2e-93  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  47.37 
 
 
583 aa  343  4e-93  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  52.93 
 
 
513 aa  343  5e-93  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  60.39 
 
 
575 aa  343  7e-93  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  43.21 
 
 
569 aa  342  9e-93  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  41.59 
 
 
553 aa  342  9e-93  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  40.91 
 
 
537 aa  342  1e-92  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_009075  BURPS668_A2764  methyl-accepting chemotaxis protein  42.12 
 
 
562 aa  340  2.9999999999999998e-92  Burkholderia pseudomallei 668  Bacteria  normal  0.627836  n/a   
 
 
-
 
NC_008784  BMASAVP1_1321  methyl-accepting chemotaxis protein  42.22 
 
 
565 aa  340  2.9999999999999998e-92  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0152  methyl-accepting chemotaxis protein  42.22 
 
 
565 aa  340  2.9999999999999998e-92  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1029  methyl-accepting chemotaxis protein  42.12 
 
 
562 aa  340  2.9999999999999998e-92  Burkholderia pseudomallei 1710b  Bacteria  normal  0.815966  n/a   
 
 
-
 
NC_009079  BMA10247_A0176  methyl-accepting chemotaxis protein  42.22 
 
 
565 aa  340  2.9999999999999998e-92  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2620  methyl-accepting chemotaxis protein  42.22 
 
 
562 aa  340  5e-92  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  41.65 
 
 
555 aa  340  5e-92  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  44.37 
 
 
552 aa  338  1.9999999999999998e-91  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  44.94 
 
 
525 aa  337  2.9999999999999997e-91  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  51.87 
 
 
562 aa  336  7.999999999999999e-91  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  41.76 
 
 
567 aa  335  1e-90  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  55.37 
 
 
581 aa  334  2e-90  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  50.87 
 
 
595 aa  334  2e-90  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
511 aa  332  8e-90  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  43.96 
 
 
615 aa  332  1e-89  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  41.57 
 
 
596 aa  332  1e-89  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  43.96 
 
 
615 aa  332  1e-89  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  40.15 
 
 
561 aa  331  2e-89  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  50.49 
 
 
536 aa  331  2e-89  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  55.73 
 
 
566 aa  330  3e-89  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_013421  Pecwa_4355  methyl-accepting chemotaxis sensory transducer  40.85 
 
 
540 aa  330  4e-89  Pectobacterium wasabiae WPP163  Bacteria  normal  0.31766  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  39.67 
 
 
543 aa  330  4e-89  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  42.83 
 
 
586 aa  330  5.0000000000000004e-89  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  60.68 
 
 
516 aa  330  5.0000000000000004e-89  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  60 
 
 
577 aa  330  6e-89  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  57.14 
 
 
650 aa  329  7e-89  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  60.31 
 
 
600 aa  329  9e-89  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0449  methyl-accepting chemotaxis protein  42.64 
 
 
562 aa  328  1.0000000000000001e-88  Burkholderia thailandensis E264  Bacteria  normal  0.123732  n/a   
 
 
-
 
NC_003296  RS02364  putative methyl-accepting chemotaxis transducer transmembrane protein  44.02 
 
 
524 aa  327  2.0000000000000001e-88  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0291845 
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  60.43 
 
 
588 aa  328  2.0000000000000001e-88  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_012880  Dd703_2474  methyl-accepting chemotaxis sensory transducer  39.24 
 
 
552 aa  328  2.0000000000000001e-88  Dickeya dadantii Ech703  Bacteria  normal  0.356267  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
598 aa  328  2.0000000000000001e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  59.88 
 
 
608 aa  327  3e-88  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  59.88 
 
 
608 aa  327  3e-88  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  58.77 
 
 
433 aa  326  5e-88  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4072  methyl-accepting chemotaxis sensory transducer  40.23 
 
 
540 aa  326  6e-88  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  53.69 
 
 
537 aa  325  9e-88  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_010625  Bphy_5592  methyl-accepting chemotaxis sensory transducer  46.14 
 
 
567 aa  325  1e-87  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  40.82 
 
 
542 aa  325  1e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  45.22 
 
 
622 aa  325  1e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  56.92 
 
 
585 aa  325  1e-87  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  59.33 
 
 
601 aa  325  2e-87  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_27970  chemotaxis sensory transducer  42.37 
 
 
575 aa  325  2e-87  Azotobacter vinelandii DJ  Bacteria  normal  0.0997024  n/a   
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  42.72 
 
 
513 aa  323  5e-87  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4443  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
630 aa  323  7e-87  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  38.88 
 
 
559 aa  322  8e-87  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  38.68 
 
 
553 aa  323  8e-87  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
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