More than 300 homologs were found in PanDaTox collection
for query gene Rfer_3137 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  100 
 
 
532 aa  1053    Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  52.17 
 
 
589 aa  452  1.0000000000000001e-126  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  51.02 
 
 
578 aa  442  1e-123  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  51.52 
 
 
580 aa  438  1e-121  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  73.65 
 
 
586 aa  436  1e-121  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  69.91 
 
 
578 aa  429  1e-119  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  56.13 
 
 
583 aa  428  1e-118  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  69.49 
 
 
579 aa  426  1e-118  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  55.09 
 
 
552 aa  425  1e-117  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  50.82 
 
 
542 aa  421  1e-116  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  48.78 
 
 
537 aa  405  1.0000000000000001e-112  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  69.28 
 
 
596 aa  407  1.0000000000000001e-112  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  66.47 
 
 
579 aa  408  1.0000000000000001e-112  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  47.32 
 
 
557 aa  406  1.0000000000000001e-112  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  70.65 
 
 
527 aa  399  9.999999999999999e-111  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  50.48 
 
 
584 aa  399  9.999999999999999e-111  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  55 
 
 
573 aa  391  1e-107  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  48.74 
 
 
511 aa  387  1e-106  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  73.68 
 
 
598 aa  386  1e-106  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  68.9 
 
 
515 aa  383  1e-105  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  69.35 
 
 
589 aa  383  1e-105  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_008752  Aave_0772  methyl-accepting chemotaxis sensory transducer  49.12 
 
 
612 aa  373  1e-102  Acidovorax citrulli AAC00-1  Bacteria  normal  0.343543  normal  0.663369 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  74.44 
 
 
592 aa  375  1e-102  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  68.23 
 
 
471 aa  371  1e-101  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  45.5 
 
 
553 aa  370  1e-101  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  61.81 
 
 
535 aa  371  1e-101  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  51.84 
 
 
536 aa  370  1e-101  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  68.06 
 
 
659 aa  368  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  46.05 
 
 
554 aa  367  1e-100  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  59.83 
 
 
532 aa  363  5.0000000000000005e-99  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2764  methyl-accepting chemotaxis protein  43.95 
 
 
562 aa  363  6e-99  Burkholderia pseudomallei 668  Bacteria  normal  0.627836  n/a   
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  62.62 
 
 
598 aa  362  9e-99  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_007650  BTH_II0449  methyl-accepting chemotaxis protein  44.95 
 
 
562 aa  361  1e-98  Burkholderia thailandensis E264  Bacteria  normal  0.123732  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1029  methyl-accepting chemotaxis protein  43.95 
 
 
562 aa  361  2e-98  Burkholderia pseudomallei 1710b  Bacteria  normal  0.815966  n/a   
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  54.06 
 
 
558 aa  361  2e-98  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  60.29 
 
 
519 aa  361  2e-98  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008784  BMASAVP1_1321  methyl-accepting chemotaxis protein  44.19 
 
 
565 aa  360  3e-98  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0152  methyl-accepting chemotaxis protein  44.19 
 
 
565 aa  360  3e-98  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0176  methyl-accepting chemotaxis protein  44.19 
 
 
565 aa  360  3e-98  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  46.54 
 
 
569 aa  360  4e-98  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  64.05 
 
 
511 aa  359  7e-98  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  64.05 
 
 
526 aa  359  8e-98  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  64.05 
 
 
546 aa  359  9e-98  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  64.05 
 
 
546 aa  359  9e-98  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  64.05 
 
 
546 aa  359  9e-98  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  64.05 
 
 
546 aa  359  9e-98  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  63.75 
 
 
546 aa  358  9.999999999999999e-98  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2620  methyl-accepting chemotaxis protein  44.19 
 
 
562 aa  358  9.999999999999999e-98  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  64.92 
 
 
537 aa  358  9.999999999999999e-98  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  57.7 
 
 
579 aa  358  1.9999999999999998e-97  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  44.78 
 
 
573 aa  358  1.9999999999999998e-97  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  63.55 
 
 
512 aa  357  2.9999999999999997e-97  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  69.73 
 
 
614 aa  357  3.9999999999999996e-97  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  61.49 
 
 
597 aa  357  3.9999999999999996e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.96 
 
 
564 aa  356  5e-97  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  65.7 
 
 
594 aa  356  5.999999999999999e-97  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  44.91 
 
 
586 aa  355  7.999999999999999e-97  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  68.32 
 
 
589 aa  355  8.999999999999999e-97  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  68.6 
 
 
653 aa  355  1e-96  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  68.6 
 
 
653 aa  355  1e-96  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
539 aa  355  1e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_008752  Aave_3444  methyl-accepting chemotaxis sensory transducer  65.47 
 
 
517 aa  355  1e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  0.679068  normal  0.0634638 
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  54.64 
 
 
581 aa  354  2e-96  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_008752  Aave_4446  methyl-accepting chemotaxis sensory transducer  56.99 
 
 
605 aa  354  2e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0260008  normal  0.622584 
 
 
-
 
NC_008752  Aave_4495  methyl-accepting chemotaxis sensory transducer  57.26 
 
 
605 aa  354  2e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0928828 
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  64.26 
 
 
576 aa  354  2.9999999999999997e-96  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_010622  Bphy_1586  methyl-accepting chemotaxis sensory transducer  56.02 
 
 
553 aa  352  1e-95  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  57.35 
 
 
585 aa  351  2e-95  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
547 aa  351  2e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  62.3 
 
 
519 aa  350  3e-95  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  61.24 
 
 
627 aa  350  5e-95  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  55.64 
 
 
613 aa  348  1e-94  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  56.32 
 
 
520 aa  348  2e-94  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  61.71 
 
 
559 aa  348  2e-94  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  60.82 
 
 
521 aa  347  3e-94  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  64.74 
 
 
566 aa  346  7e-94  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  61.35 
 
 
572 aa  345  8.999999999999999e-94  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  50.59 
 
 
559 aa  345  1e-93  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  60.23 
 
 
521 aa  345  1e-93  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
642 aa  345  1e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_012912  Dd1591_4047  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
559 aa  343  4e-93  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3865  methyl-accepting chemotaxis sensory transducer  41.28 
 
 
551 aa  343  5.999999999999999e-93  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  59.42 
 
 
611 aa  341  2e-92  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  61.26 
 
 
544 aa  340  2.9999999999999998e-92  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
618 aa  340  2.9999999999999998e-92  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_010002  Daci_0742  methyl-accepting chemotaxis sensory transducer  44.27 
 
 
581 aa  340  2.9999999999999998e-92  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  58.41 
 
 
541 aa  340  2.9999999999999998e-92  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_012880  Dd703_3863  methyl-accepting chemotaxis sensory transducer  41.07 
 
 
560 aa  340  5e-92  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  45.64 
 
 
513 aa  339  9e-92  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  60.94 
 
 
551 aa  338  9.999999999999999e-92  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  61.29 
 
 
519 aa  337  2.9999999999999997e-91  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  59.34 
 
 
515 aa  337  2.9999999999999997e-91  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.97 
 
 
519 aa  337  3.9999999999999995e-91  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  56.65 
 
 
566 aa  336  5e-91  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  55.21 
 
 
559 aa  336  7e-91  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  57.52 
 
 
555 aa  336  7.999999999999999e-91  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  64.97 
 
 
585 aa  336  7.999999999999999e-91  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.34 
 
 
515 aa  335  9e-91  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  60.4 
 
 
554 aa  335  9e-91  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  63.84 
 
 
621 aa  335  1e-90  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
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