More than 300 homologs were found in PanDaTox collection
for query gene Plim_2343 on replicon NC_014148
Organism: Planctomyces limnophilus DSM 3776



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014148  Plim_2343  methyl-accepting chemotaxis sensory transducer  100 
 
 
377 aa  774    Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3960  methyl-accepting chemotaxis sensory transducer  37.9 
 
 
367 aa  226  4e-58  Caulobacter sp. K31  Bacteria  normal  0.273719  normal  0.409706 
 
 
-
 
NC_007347  Reut_A0771  methyl-accepting chemotaxis sensory transducer  35.9 
 
 
409 aa  210  4e-53  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0082  chemotaxis sensory transducer  33.97 
 
 
359 aa  208  1e-52  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3999  methyl-accepting chemotaxis sensory transducer  36 
 
 
362 aa  208  1e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.80171  normal 
 
 
-
 
NC_007952  Bxe_B1126  methyl-accepting chemotaxis sensory transducer  37.71 
 
 
351 aa  205  1e-51  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4930  methyl-accepting chemotaxis sensory transducer  34.28 
 
 
362 aa  199  6e-50  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.226636 
 
 
-
 
NC_010725  Mpop_4363  methyl-accepting chemotaxis sensory transducer  36.81 
 
 
345 aa  198  1.0000000000000001e-49  Methylobacterium populi BJ001  Bacteria  normal  0.139679  normal  0.610806 
 
 
-
 
NC_010511  M446_3313  methyl-accepting chemotaxis sensory transducer  36.59 
 
 
361 aa  197  2.0000000000000003e-49  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4260  methyl-accepting chemotaxis sensory transducer  35.43 
 
 
352 aa  196  5.000000000000001e-49  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0080  chemotaxis sensory transducer  32.96 
 
 
362 aa  193  5e-48  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0006  methyl-accepting chemotaxis sensory transducer  31.78 
 
 
359 aa  192  6e-48  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.906877  normal 
 
 
-
 
NC_007643  Rru_A0081  chemotaxis sensory transducer  31.96 
 
 
362 aa  191  2e-47  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3892  putative methyl-accepting chemotaxis protein  34.86 
 
 
352 aa  190  2.9999999999999997e-47  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.344749 
 
 
-
 
NC_011757  Mchl_2252  methyl-accepting chemotaxis sensory transducer  35.34 
 
 
364 aa  185  9e-46  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1975  chemotaxis sensory transducer  35.34 
 
 
364 aa  185  1.0000000000000001e-45  Methylobacterium extorquens PA1  Bacteria  normal  0.129929  normal 
 
 
-
 
NC_010505  Mrad2831_5068  methyl-accepting chemotaxis sensory transducer  35.09 
 
 
371 aa  182  7e-45  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0531667 
 
 
-
 
NC_010725  Mpop_1930  methyl-accepting chemotaxis sensory transducer  35.51 
 
 
366 aa  180  4e-44  Methylobacterium populi BJ001  Bacteria  normal  0.702252  normal  0.0243578 
 
 
-
 
NC_011369  Rleg2_0931  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
368 aa  177  2e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.219476  normal  0.828358 
 
 
-
 
NC_011989  Avi_1377  methyl-accepting chemotaxis protein  32.69 
 
 
370 aa  177  4e-43  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1080  methyl-accepting chemotaxis sensory transducer  34.06 
 
 
368 aa  176  8e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2724  methyl-accepting chemotaxis sensory transducer  32.63 
 
 
341 aa  154  2e-36  Sphingomonas wittichii RW1  Bacteria  normal  0.894036  normal 
 
 
-
 
NC_011830  Dhaf_1064  methyl-accepting chemotaxis sensory transducer with Cache sensor  26.06 
 
 
334 aa  94.4  3e-18  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1071  CheW protein  28.71 
 
 
891 aa  78.2  0.0000000000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1760  CheW protein  28.57 
 
 
875 aa  77  0.0000000000005  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1709  hypothetical protein  27.06 
 
 
668 aa  76.6  0.0000000000006  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2145  hypothetical protein  22.86 
 
 
692 aa  76.6  0.0000000000006  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2970  CheW protein  29.24 
 
 
841 aa  74.7  0.000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0470  CheW protein  25.93 
 
 
848 aa  56.2  0.0000009  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1630  methyl-accepting chemotaxis sensory transducer  34.34 
 
 
605 aa  55.5  0.000001  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00337409  n/a   
 
 
-
 
NC_010002  Daci_3594  CheW protein  31.45 
 
 
946 aa  53.5  0.000006  Delftia acidovorans SPH-1  Bacteria  normal  0.0170517  normal  0.147677 
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  27.82 
 
 
1150 aa  53.1  0.000007  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_013216  Dtox_2743  methyl-accepting chemotaxis sensory transducer  32.64 
 
 
394 aa  53.1  0.000007  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.322952 
 
 
-
 
NC_007644  Moth_0572  methyl-accepting chemotaxis sensory transducer  40.24 
 
 
245 aa  53.1  0.000008  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00328784  normal 
 
 
-
 
NC_011989  Avi_1547  methyl-accepting chemotaxis protein  33.04 
 
 
635 aa  51.6  0.00002  Agrobacterium vitis S4  Bacteria  normal  0.0672502  n/a   
 
 
-
 
NC_013216  Dtox_2563  methyl-accepting chemotaxis sensory transducer  32.06 
 
 
394 aa  52  0.00002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.721933  normal  0.195344 
 
 
-
 
NC_013174  Jden_1995  methyl-accepting chemotaxis sensory transducer  33.03 
 
 
394 aa  50.8  0.00003  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1148  methyl-accepting chemotaxis sensory transducer with Cache sensor  32 
 
 
650 aa  50.8  0.00004  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.605213  n/a   
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  34.19 
 
 
533 aa  50.4  0.00005  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_011989  Avi_3799  methyl-accepting chemotaxis protein  31.25 
 
 
601 aa  50.4  0.00005  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1710  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.48 
 
 
1355 aa  50.4  0.00005  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007520  Tcr_1394  methyl-accepting chemotaxis sensory transducer  33.93 
 
 
840 aa  50.1  0.00007  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0355  methyl-accepting chemotaxis sensory transducer  31.96 
 
 
280 aa  48.9  0.0001  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.271483  n/a   
 
 
-
 
NC_004578  PSPTO_5352  methyl-accepting chemotaxis protein  33.03 
 
 
448 aa  48.9  0.0001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3236  methyl-accepting chemotaxis sensory transducer  31.07 
 
 
476 aa  48.9  0.0001  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.315544  n/a   
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  29.93 
 
 
518 aa  49.3  0.0001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_5009  methyl-accepting chemotaxis sensory transducer  27.78 
 
 
537 aa  48.1  0.0002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5149  methyl-accepting chemotaxis sensory transducer  31.61 
 
 
468 aa  48.5  0.0002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.853292  normal 
 
 
-
 
NC_013173  Dbac_1064  methyl-accepting chemotaxis sensory transducer  32.94 
 
 
573 aa  48.5  0.0002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.223413  n/a   
 
 
-
 
NC_009943  Dole_0205  methyl-accepting chemotaxis sensory transducer  31.53 
 
 
647 aa  48.9  0.0002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  28.87 
 
 
904 aa  48.1  0.0002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_008543  Bcen2424_5132  methyl-accepting chemotaxis sensory transducer  31.07 
 
 
468 aa  48.9  0.0002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.202601  normal 
 
 
-
 
NC_010725  Mpop_2766  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
457 aa  48.1  0.0002  Methylobacterium populi BJ001  Bacteria  normal  normal  0.626967 
 
 
-
 
NC_010001  Cphy_0436  methyl-accepting chemotaxis sensory transducer  27.92 
 
 
564 aa  48.5  0.0002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1961  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
535 aa  48.9  0.0002  Jonesia denitrificans DSM 20603  Bacteria  normal  0.286616  normal 
 
 
-
 
NC_009784  VIBHAR_04747  methyl-accepting chemotaxis protein  35.44 
 
 
361 aa  47.8  0.0003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013522  Taci_0309  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.76 
 
 
677 aa  47.8  0.0003  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  unclonable  0.000000502143  n/a   
 
 
-
 
NC_010681  Bphyt_2304  methyl-accepting chemotaxis sensory transducer  29.82 
 
 
468 aa  48.1  0.0003  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.816033 
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.05 
 
 
527 aa  47.8  0.0003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  28.36 
 
 
545 aa  47.8  0.0003  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_011830  Dhaf_0516  methyl-accepting chemotaxis sensory transducer  37.84 
 
 
664 aa  47.8  0.0003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0344435  n/a   
 
 
-
 
NC_003910  CPS_3929  methyl-accepting chemotaxis protein  35.8 
 
 
505 aa  47.4  0.0004  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  33.33 
 
 
653 aa  47.8  0.0004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_011989  Avi_3923  methyl-accepting chemotaxis protein  30.08 
 
 
843 aa  47.4  0.0004  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2814  methyl-accepting chemotaxis sensory transducer  39.73 
 
 
722 aa  47.4  0.0004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3325  methyl-accepting chemotaxis sensory transducer  44.07 
 
 
491 aa  47.8  0.0004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  29.59 
 
 
511 aa  47.4  0.0004  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_007963  Csal_0906  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.38 
 
 
440 aa  47.4  0.0004  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1682  methyl-accepting chemotaxis sensory transducer  30.41 
 
 
749 aa  47.4  0.0004  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0141753  n/a   
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.6 
 
 
522 aa  47.4  0.0004  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2869  methyl-accepting chemotaxis sensory transducer  43.33 
 
 
457 aa  47.4  0.0004  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.394576  normal 
 
 
-
 
NC_013522  Taci_0209  methyl-accepting chemotaxis sensory transducer  34.86 
 
 
574 aa  47.4  0.0004  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.0000416646  n/a   
 
 
-
 
NC_010172  Mext_2643  chemotaxis sensory transducer  43.33 
 
 
457 aa  47.4  0.0004  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.861208 
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  32 
 
 
533 aa  47.4  0.0004  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_4113  methyl-accepting chemotaxis protein  30.43 
 
 
778 aa  47  0.0005  Agrobacterium vitis S4  Bacteria  normal  0.433818  n/a   
 
 
-
 
NC_013216  Dtox_3798  methyl-accepting chemotaxis sensory transducer  31.67 
 
 
397 aa  47  0.0005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0724  chemotaxis sensory transducer  36.73 
 
 
405 aa  47  0.0005  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.435605 
 
 
-
 
NC_013174  Jden_0359  methyl-accepting chemotaxis sensory transducer  35.42 
 
 
542 aa  47  0.0005  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I1636  methyl-accepting chemotaxis protein  37.33 
 
 
547 aa  47.4  0.0005  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1709  methyl-accepting chemotaxis sensory transducer  43.75 
 
 
568 aa  47  0.0005  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.55655  normal  0.12205 
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.6 
 
 
522 aa  47.4  0.0005  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1957  methyl-accepting chemotaxis sensory transducer  31.36 
 
 
344 aa  47  0.0005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.25398  n/a   
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.6 
 
 
522 aa  47  0.0005  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_0262  chemotaxis sensory transducer  29.48 
 
 
650 aa  47  0.0005  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3428  methyl-accepting chemotaxis sensory transducer  34.25 
 
 
429 aa  46.6  0.0006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007796  Mhun_2032  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.62 
 
 
1285 aa  47  0.0006  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.295891 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  34.94 
 
 
562 aa  46.6  0.0007  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  32.54 
 
 
511 aa  46.6  0.0007  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1716  methyl-accepting chemotaxis sensory transducer  38.64 
 
 
564 aa  46.6  0.0007  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0822312  normal  0.62395 
 
 
-
 
NC_009943  Dole_1751  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
739 aa  46.6  0.0007  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.000000403913  n/a   
 
 
-
 
NC_013204  Elen_2673  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
524 aa  46.6  0.0007  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.647949 
 
 
-
 
NC_010003  Pmob_0699  methyl-accepting chemotaxis sensory transducer  42.47 
 
 
282 aa  46.6  0.0007  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_1204  MCP-domain signal transduction protein  33.6 
 
 
431 aa  46.2  0.0008  Campylobacter lari RM2100  Bacteria  normal  0.302368  n/a   
 
 
-
 
NC_013173  Dbac_1799  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.98 
 
 
668 aa  46.2  0.0008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.481177  n/a   
 
 
-
 
NC_008751  Dvul_0568  methyl-accepting chemotaxis sensory transducer  32.35 
 
 
813 aa  46.2  0.0008  Desulfovibrio vulgaris DP4  Bacteria  normal  0.390162  normal  0.929296 
 
 
-
 
NC_013521  Sked_30970  methyl-accepting chemotaxis protein  30.84 
 
 
562 aa  46.6  0.0008  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  35.14 
 
 
541 aa  46.2  0.0009  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012856  Rpic12D_0496  methyl-accepting chemotaxis sensory transducer  46.03 
 
 
470 aa  46.2  0.0009  Ralstonia pickettii 12D  Bacteria  normal  normal  0.453159 
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  26.72 
 
 
638 aa  45.8  0.001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  28.86 
 
 
646 aa  46.2  0.001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
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