| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_2814 |
|---|
| Symbol | |
|---|
| ID | 3757837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 2799295 |
|---|
| End bp | 2801463 |
|---|
| Gene Length | 2169 bp |
|---|
| Protein Length | 722 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637783715 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_389304 |
|---|
| Protein GI | 78357855 |
|---|
| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2703] Hemerythrin |
|---|
| TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATAC GAACCAGATT CATAGCATCG CTTGCCGGCG TGCTGGCACT TACCGCCGTC
ATGTACGCGG CCAATCTGTA TGTGATAGCC GGCCAGCGGT CAGACAGTGT TTCCATAAAC
CTTGCAGGAC GGCAGCGCAT GCTGGCCGAA CTGATTACCG GACGGGCCGT GGCGCTGATA
CACAGCGCAC AGTCCGGCAC TGACGATACC GCCTCCGAAA AGCTGCTCCG CCGGGCCGTC
AGCGCTTTTG AAACCACGCA CAATGCTCTT TCGGGCAGGG GGCAGGCGCC CCTTTCTCTG
GAACCTTCCG GCCCTTCGGC AACGCTGGGG CAGCCTTCCG CCGCCACGCT GGCATTGCTG
CGCAGAACCG ACACGCTGTG GTCACAGCAT AAAAAACTGG TGGAGCGCGC ACTGAAAGGC
GACAGCCGTG CAGTACCCGA CCTGCTGCAG ATAACGCCGC GCCTGCGTGC CACTCTGAAC
GACGTGGTGC TGGCTTTGCA GCAGGAGGCA GAACAGCGCA CATCTACGCT CACAGCCGTG
CAGACGGCAG GGTCTGCCGC CATTGTTCTG CTGGTGCTTG TCACTCTGTA TGCCTGCATG
CGTTCACTGC TGGCGCCGCT GGACAGGCTG CGGGCCTACG CGCGCGACAT CGCAGGCGGC
AATCTGGACG CGCAGGCGCA GGGGCAATAT GTATGCGAAC TGGCCGACCT GAAGCACGAC
ATGACCACCA TGGTGGAAAG CCTGAAGGCC ACCATGCTGG AAGCCCGCAA AAATCATCAG
GAAGCGGACG CCAGCGCACA GCAGGCGCAA AAAACTCTGA AAGAAGCCCA TGCACATCAG
GCACAGGCGC AGGAACTGCT TGCCGCGGTA AACAATGCCA GCACCAATGC CAGAGGCTTT
TCCGAAAAAG TATACGCGGC AGTGGAAGAG CTTTCCGCAC GCATCGAGCA GGTGAACGCC
AACGTGGACA TCCAGCGCGA CCGCATGATG GAAACAGCCA CCGCCATGGA AGAAATGAAC
GGCACCGTGT ACGAAGTGGC CCGCAATGCC GCCGATGCAG CCGGCAGCGC CGCGCGTTCC
AAAGAAAACG CCCAGACAGG CGCAAAGGGT GTGCACAGCG CGGTGGAATC CATAACAATC
ATCGAAAAGC GTTTTCTGCA TCTCAAGGAA ACCATGGGGC AGCTGGGCGA ACAGGCCAGA
AGCATCGGCA CCATTATCAC CACCATCAAC GATATTGCCG ACCAGACCAA CCTGCTGGCG
CTGAACGCAG CCATCGAAGC TGCACGCGCC GGCGATGCAG GCCGCGGCTT TGCCGTGGTG
GCCGATGAAG TCCGCAAGCT TGCCGAAAAA ACCATGACCG CCACCAAGGA AGTAAGCGAA
AGCGTGCTGC TGATTCAGGA ACGCACACGC GAAAACATGA CCGCCGTGGA ACAGACCGCC
GCAGACCTGG AAAACAGCAC CCGCACCGCC AGTGAATCAG GTCGCTTCAT GGAAGAAATA
GTGCATCTTG TGGAAGACAC AGCCGGACAG GTGGAGTCCA TCGCCGCCGC GTCGGAAGAA
CAATCCGCCG CGTCGGAACA GATAAACCGC GCCGTTTCCG ACGTGACCCG CGTGGCCACG
GAAACAGCAG ACGGCATGAA TGCGGCGGCG CACGCCCTCA TGGAGGTATC CGGCCTTGTG
GAAGAGCTGG ACAGCATACT GCGCGACCTT GCCGCGCGGG GCAACGGCTC GGCTGTAACC
GGTGCGGCCA CGGCGGACAC AGGGCAGCTT TTCCGCTGGA CGGATGATCT CTCGGTCAAA
ATCAGTTCCA TCGACGAACA GCATAAAGGA CTGGTAAACC TGATCAACGA ACTGCACGAA
GCCATGCGCC GGCGCAAAAG CGCAAGCCAT CTCATAGCCA TAGTCGGAAG GCTTAAAGAC
TATACCGTGT ACCATTTCGA TACCGAAGAA AAACTCTTCC ACAAACACGG CTACCCGGCC
ACGGCGGAAC ATATACAGGA ACACCGCAAG TTCGTGGAGA ATGTACTGGC CTTTGAAAAA
GACCTGCAGC AGGGCAAGGT TACCGTGACC ATGGATGTCA TGCGGTTTCT TAAAAACTGG
CTCACGGGAC ATATCAAGGG CACGGACAAA AAATACAGCG GCTATCTGGT GCGCAAAGGC
GTGCGCTGA
|
|---|
| Protein sequence | MTIRTRFIAS LAGVLALTAV MYAANLYVIA GQRSDSVSIN LAGRQRMLAE LITGRAVALI
HSAQSGTDDT ASEKLLRRAV SAFETTHNAL SGRGQAPLSL EPSGPSATLG QPSAATLALL
RRTDTLWSQH KKLVERALKG DSRAVPDLLQ ITPRLRATLN DVVLALQQEA EQRTSTLTAV
QTAGSAAIVL LVLVTLYACM RSLLAPLDRL RAYARDIAGG NLDAQAQGQY VCELADLKHD
MTTMVESLKA TMLEARKNHQ EADASAQQAQ KTLKEAHAHQ AQAQELLAAV NNASTNARGF
SEKVYAAVEE LSARIEQVNA NVDIQRDRMM ETATAMEEMN GTVYEVARNA ADAAGSAARS
KENAQTGAKG VHSAVESITI IEKRFLHLKE TMGQLGEQAR SIGTIITTIN DIADQTNLLA
LNAAIEAARA GDAGRGFAVV ADEVRKLAEK TMTATKEVSE SVLLIQERTR ENMTAVEQTA
ADLENSTRTA SESGRFMEEI VHLVEDTAGQ VESIAAASEE QSAASEQINR AVSDVTRVAT
ETADGMNAAA HALMEVSGLV EELDSILRDL AARGNGSAVT GAATADTGQL FRWTDDLSVK
ISSIDEQHKG LVNLINELHE AMRRRKSASH LIAIVGRLKD YTVYHFDTEE KLFHKHGYPA
TAEHIQEHRK FVENVLAFEK DLQQGKVTVT MDVMRFLKNW LTGHIKGTDK KYSGYLVRKG
VR
|
|---|
| |