More than 300 homologs were found in PanDaTox collection
for query gene Namu_0487 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_0487  two component transcriptional regulator, LuxR family  100 
 
 
215 aa  422  1e-117  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2342  response regulator receiver  66.34 
 
 
212 aa  265  5e-70  Gordonia bronchialis DSM 43247  Bacteria  normal  0.88989  n/a   
 
 
-
 
NC_009338  Mflv_0730  two component LuxR family transcriptional regulator  58.41 
 
 
214 aa  241  7.999999999999999e-63  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.47186  normal 
 
 
-
 
NC_009565  TBFG_10861  nitrate/nitrite response transcriptional regulatory protein narL  56.94 
 
 
216 aa  227  9e-59  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000061441 
 
 
-
 
NC_013739  Cwoe_5387  two component transcriptional regulator, LuxR family  51.67 
 
 
215 aa  207  1e-52  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4386  two component transcriptional regulator, LuxR family  44.66 
 
 
214 aa  164  1.0000000000000001e-39  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  41.55 
 
 
210 aa  152  5e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  37.2 
 
 
209 aa  151  8e-36  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  41.06 
 
 
207 aa  149  2e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  37.56 
 
 
212 aa  146  2.0000000000000003e-34  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  42.03 
 
 
213 aa  144  1e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.999676 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  41.95 
 
 
212 aa  143  2e-33  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  41.55 
 
 
206 aa  142  3e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  35.89 
 
 
210 aa  141  9e-33  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  36.71 
 
 
210 aa  140  9.999999999999999e-33  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  36.71 
 
 
210 aa  139  3e-32  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  36.71 
 
 
210 aa  139  3e-32  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  36.71 
 
 
210 aa  139  3e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  36.71 
 
 
210 aa  139  3e-32  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  36.71 
 
 
210 aa  139  3e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  36.71 
 
 
210 aa  139  3e-32  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  36.23 
 
 
210 aa  139  3.9999999999999997e-32  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  36.71 
 
 
210 aa  139  3.9999999999999997e-32  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  40.57 
 
 
216 aa  138  4.999999999999999e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK1321  response regulator  36.71 
 
 
210 aa  138  7e-32  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_010644  Emin_1197  two component LuxR family transcriptional regulator  33.18 
 
 
225 aa  136  2e-31  Elusimicrobium minutum Pei191  Bacteria  normal  normal  0.0485473 
 
 
-
 
NC_008578  Acel_0973  two component LuxR family transcriptional regulator  37.21 
 
 
216 aa  137  2e-31  Acidothermus cellulolyticus 11B  Bacteria  normal  0.255067  normal  0.404517 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  39.42 
 
 
211 aa  135  4e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  40.58 
 
 
234 aa  135  4e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  38.6 
 
 
222 aa  135  6.0000000000000005e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  39.23 
 
 
212 aa  134  9.999999999999999e-31  Caulobacter sp. K31  Bacteria  normal  normal  0.881689 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  35.89 
 
 
210 aa  133  1.9999999999999998e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  41.04 
 
 
218 aa  133  1.9999999999999998e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  38.65 
 
 
211 aa  132  3e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  40.58 
 
 
209 aa  132  3e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  39.71 
 
 
215 aa  132  3e-30  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  34.4 
 
 
224 aa  132  3e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_4871  two component transcriptional regulator, LuxR family  36.92 
 
 
222 aa  132  3e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.134443  normal  0.31614 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  40.1 
 
 
209 aa  132  5e-30  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  37.68 
 
 
213 aa  131  7.999999999999999e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_009727  CBUD_0726  response regulator  33.33 
 
 
211 aa  130  1.0000000000000001e-29  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  33.02 
 
 
215 aa  130  1.0000000000000001e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0074  response regulator receiver protein  40.38 
 
 
207 aa  130  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  32.08 
 
 
209 aa  130  2.0000000000000002e-29  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  33.79 
 
 
225 aa  129  2.0000000000000002e-29  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  35.58 
 
 
209 aa  130  2.0000000000000002e-29  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  33.49 
 
 
216 aa  130  2.0000000000000002e-29  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  36.02 
 
 
224 aa  129  3e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  38.94 
 
 
209 aa  129  3e-29  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  37.68 
 
 
217 aa  129  3e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  33.65 
 
 
217 aa  129  4.0000000000000003e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  32.08 
 
 
216 aa  129  4.0000000000000003e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  33.63 
 
 
242 aa  128  5.0000000000000004e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_010117  COXBURSA331_A0830  transcriptional regulator  32.86 
 
 
211 aa  128  5.0000000000000004e-29  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  33.8 
 
 
214 aa  128  7.000000000000001e-29  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  33.49 
 
 
213 aa  127  1.0000000000000001e-28  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  38.21 
 
 
214 aa  127  1.0000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  33.33 
 
 
236 aa  127  1.0000000000000001e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_009380  Strop_3279  response regulator receiver  35.68 
 
 
221 aa  127  1.0000000000000001e-28  Salinispora tropica CNB-440  Bacteria  normal  0.97215  normal 
 
 
-
 
NC_009523  RoseRS_0938  two component LuxR family transcriptional regulator  33.63 
 
 
242 aa  127  1.0000000000000001e-28  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_3511  two component LuxR family transcriptional regulator  35.68 
 
 
221 aa  127  2.0000000000000002e-28  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0444635 
 
 
-
 
NC_009632  SaurJH1_1972  response regulator receiver  33.65 
 
 
209 aa  126  2.0000000000000002e-28  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  40.1 
 
 
209 aa  126  2.0000000000000002e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_009487  SaurJH9_1938  two component LuxR family transcriptional regulator  33.65 
 
 
209 aa  126  2.0000000000000002e-28  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4304  response regulator receiver  39.44 
 
 
216 aa  126  3e-28  Gordonia bronchialis DSM 43247  Bacteria  normal  0.894661  n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  38.46 
 
 
211 aa  125  3e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  39.13 
 
 
212 aa  126  3e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  35.75 
 
 
224 aa  126  3e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_011884  Cyan7425_1053  two component transcriptional regulator, LuxR family  34.48 
 
 
236 aa  125  4.0000000000000003e-28  Cyanothece sp. PCC 7425  Bacteria  normal  0.295708  normal  0.0294181 
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  37.8 
 
 
213 aa  125  5e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal 
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  35.38 
 
 
213 aa  125  5e-28  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  39.5 
 
 
218 aa  125  6e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  32.24 
 
 
215 aa  125  6e-28  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  37.02 
 
 
207 aa  125  6e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  34.43 
 
 
228 aa  125  7e-28  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  35.32 
 
 
241 aa  124  7e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  36.24 
 
 
242 aa  124  1e-27  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  37.8 
 
 
214 aa  124  1e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  36.74 
 
 
221 aa  124  1e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_010571  Oter_2496  two component LuxR family transcriptional regulator  35.89 
 
 
212 aa  124  1e-27  Opitutus terrae PB90-1  Bacteria  normal  normal  0.996792 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  36.02 
 
 
218 aa  124  1e-27  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  36.71 
 
 
206 aa  123  2e-27  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  32.24 
 
 
215 aa  122  3e-27  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  36.19 
 
 
219 aa  123  3e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2668  two component LuxR family transcriptional regulator  36.36 
 
 
213 aa  122  3e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.18046  normal 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  32.24 
 
 
215 aa  122  4e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  32.24 
 
 
215 aa  122  4e-27  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  32.24 
 
 
215 aa  122  4e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  32.24 
 
 
215 aa  122  4e-27  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  32.24 
 
 
215 aa  122  4e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  32.24 
 
 
215 aa  122  4e-27  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  35.38 
 
 
213 aa  122  4e-27  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  29.95 
 
 
213 aa  122  5e-27  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  38.65 
 
 
207 aa  122  5e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2359  two component transcriptional regulator, LuxR family  34.21 
 
 
247 aa  122  5e-27  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0990205  decreased coverage  0.00133027 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  37.74 
 
 
209 aa  121  6e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  32.21 
 
 
213 aa  121  6e-27  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000185138 
 
 
-
 
NC_009972  Haur_1563  two component LuxR family transcriptional regulator  32.14 
 
 
257 aa  121  7e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.781509  n/a   
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  34.26 
 
 
220 aa  121  7e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  35.58 
 
 
209 aa  121  7e-27  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
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