More than 300 homologs were found in PanDaTox collection
for query gene Mpop_1932 on replicon NC_010725
Organism: Methylobacterium populi BJ001



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010725  Mpop_1932  transcriptional regulator, LuxR family  100 
 
 
241 aa  467  1.0000000000000001e-131  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0592371 
 
 
-
 
NC_011757  Mchl_2254  transcriptional regulator, LuxR family  78.7 
 
 
235 aa  325  6e-88  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1977  regulatory protein LuxR  77.73 
 
 
235 aa  318  3.9999999999999996e-86  Methylobacterium extorquens PA1  Bacteria  normal  0.215897  normal 
 
 
-
 
NC_010505  Mrad2831_0756  LuxR family transcriptional regulator  56.52 
 
 
228 aa  190  1e-47  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.826443 
 
 
-
 
NC_010511  M446_5044  LuxR family transcriptional regulator  55.02 
 
 
230 aa  187  2e-46  Methylobacterium sp. 4-46  Bacteria  normal  0.263575  hitchhiker  0.00837426 
 
 
-
 
NC_011894  Mnod_5351  transcriptional regulator, LuxR family  57.02 
 
 
229 aa  177  1e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.649636  n/a   
 
 
-
 
NC_010505  Mrad2831_1294  LuxR family transcriptional regulator  50.25 
 
 
252 aa  162  6e-39  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3523  two component LuxR family transcriptional regulator  31.43 
 
 
224 aa  78.2  0.0000000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0083  two component LuxR family transcriptional regulator  32.69 
 
 
210 aa  75.9  0.0000000000005  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1121  two component LuxR family transcriptional regulator  38.02 
 
 
222 aa  74.7  0.000000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.864132  normal  0.872256 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  36.99 
 
 
220 aa  73.6  0.000000000003  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.929677 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  37.68 
 
 
213 aa  73.2  0.000000000004  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  30.92 
 
 
213 aa  72.8  0.000000000005  Burkholderia phymatum STM815  Bacteria  normal  normal  0.53826 
 
 
-
 
NC_007973  Rmet_3576  two component LuxR family transcriptional regulator  32.11 
 
 
228 aa  71.6  0.00000000001  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2246  two component LuxR family transcriptional regulator  27.06 
 
 
214 aa  70.9  0.00000000002  Shewanella baltica OS195  Bacteria  normal  0.0703025  hitchhiker  0.00413313 
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  31.4 
 
 
215 aa  69.3  0.00000000006  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  31.4 
 
 
215 aa  69.3  0.00000000006  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  26.36 
 
 
215 aa  68.9  0.00000000006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  31.4 
 
 
215 aa  69.3  0.00000000006  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  31.4 
 
 
215 aa  69.3  0.00000000006  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  31.4 
 
 
215 aa  69.3  0.00000000006  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  31.4 
 
 
215 aa  68.9  0.00000000006  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  31.4 
 
 
215 aa  68.9  0.00000000006  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A3419  LuxR response regulator receiver  31.47 
 
 
231 aa  68.9  0.00000000007  Ralstonia eutropha JMP134  Bacteria  normal  0.393456  n/a   
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  30.2 
 
 
213 aa  68.9  0.00000000007  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A1950  hypothetical protein  30.83 
 
 
212 aa  68.6  0.00000000008  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  hitchhiker  0.0094858 
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  31.4 
 
 
215 aa  68.6  0.00000000008  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A1504  hypothetical protein  31.36 
 
 
212 aa  68.9  0.00000000008  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.000000918459 
 
 
-
 
NC_011083  SeHA_C1526  two-component response regulator EsrB  30.83 
 
 
212 aa  68.6  0.00000000008  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.577557  hitchhiker  0.00169027 
 
 
-
 
NC_011094  SeSA_A1489  EsrB  30.83 
 
 
212 aa  68.6  0.00000000008  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.121116  normal  0.320198 
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  28.08 
 
 
215 aa  68.2  0.0000000001  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_009439  Pmen_4040  two component LuxR family transcriptional regulator  34.11 
 
 
216 aa  68.6  0.0000000001  Pseudomonas mendocina ymp  Bacteria  normal  0.56786  normal 
 
 
-
 
NC_011149  SeAg_B1780  EsrB  31.36 
 
 
212 aa  67.8  0.0000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.111024  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  28.36 
 
 
215 aa  67.8  0.0000000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  28.43 
 
 
214 aa  67  0.0000000003  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_3357  two component LuxR family transcriptional regulator  36.62 
 
 
238 aa  67  0.0000000003  Opitutus terrae PB90-1  Bacteria  normal  0.1255  normal 
 
 
-
 
NC_009052  Sbal_1943  two component LuxR family transcriptional regulator  26.39 
 
 
214 aa  66.6  0.0000000003  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4476  two component transcriptional regulator, LuxR family  33.07 
 
 
215 aa  65.9  0.0000000005  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  28.43 
 
 
214 aa  66.2  0.0000000005  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal 
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  29.86 
 
 
212 aa  65.9  0.0000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_010159  YpAngola_A3945  putative DNA-binding response regulator EsrB  30.22 
 
 
210 aa  65.9  0.0000000005  Yersinia pestis Angola  Bacteria  normal  0.0480381  normal 
 
 
-
 
NC_008687  Pden_4349  two component LuxR family transcriptional regulator  33.56 
 
 
206 aa  65.9  0.0000000006  Paracoccus denitrificans PD1222  Bacteria  normal  0.20794  normal  0.534464 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  38.14 
 
 
222 aa  65.5  0.0000000007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.280021 
 
 
-
 
NC_009708  YpsIP31758_3833  putative DNA-binding response regulator EsrB  29.5 
 
 
210 aa  65.5  0.0000000008  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  30.88 
 
 
217 aa  65.5  0.0000000008  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_010465  YPK_3919  two component LuxR family transcriptional regulator  29.5 
 
 
210 aa  65.5  0.0000000008  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0788  two component LuxR family transcriptional regulator  33.07 
 
 
218 aa  65.1  0.0000000009  Burkholderia xenovorans LB400  Bacteria  normal  0.3296  normal 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  29.61 
 
 
219 aa  64.7  0.000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  40.48 
 
 
208 aa  64.3  0.000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0637899 
 
 
-
 
NC_009832  Spro_1286  two component LuxR family transcriptional regulator  34.86 
 
 
213 aa  65.1  0.000000001  Serratia proteamaculans 568  Bacteria  normal  normal  0.172682 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  27.23 
 
 
216 aa  63.9  0.000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  35.38 
 
 
234 aa  63.9  0.000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  29.45 
 
 
214 aa  64.3  0.000000002  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  34.17 
 
 
206 aa  63.9  0.000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  32.99 
 
 
208 aa  63.9  0.000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  33.85 
 
 
214 aa  63.5  0.000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.00509748 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  34.62 
 
 
220 aa  63.5  0.000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_007492  Pfl01_3254  two component LuxR family transcriptional regulator  34.13 
 
 
201 aa  63.2  0.000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.49762 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  29.03 
 
 
223 aa  63.5  0.000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  29.33 
 
 
214 aa  63.5  0.000000003  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_008228  Patl_2290  two component LuxR family transcriptional regulator  34.51 
 
 
215 aa  63.5  0.000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  26.15 
 
 
218 aa  63.2  0.000000003  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  33.85 
 
 
214 aa  63.2  0.000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.10411 
 
 
-
 
NC_009719  Plav_3606  two component LuxR family transcriptional regulator  33.57 
 
 
208 aa  63.2  0.000000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  32.21 
 
 
224 aa  62.8  0.000000005  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0709  two component LuxR family transcriptional regulator  30.72 
 
 
224 aa  62.4  0.000000006  Polaromonas sp. JS666  Bacteria  normal  0.421893  normal 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  35.65 
 
 
221 aa  62.4  0.000000006  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4976  two component transcriptional regulator, LuxR family  53.33 
 
 
218 aa  62  0.000000008  Conexibacter woesei DSM 14684  Bacteria  normal  0.289575  normal  0.034027 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  31.88 
 
 
218 aa  62  0.000000008  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  33.08 
 
 
214 aa  62  0.000000008  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  33.08 
 
 
214 aa  62  0.000000008  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0560765 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  33.08 
 
 
214 aa  62  0.000000008  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  33.08 
 
 
214 aa  62  0.000000008  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0203352 
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  33.08 
 
 
214 aa  62  0.000000008  Burkholderia cenocepacia HI2424  Bacteria  normal  hitchhiker  0.00685344 
 
 
-
 
NC_013501  Rmar_2437  two component transcriptional regulator, LuxR family  32.84 
 
 
218 aa  62  0.000000009  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0211  two component LuxR family transcriptional regulator  53.33 
 
 
228 aa  62  0.000000009  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.664514  normal 
 
 
-
 
NC_013235  Namu_2014  two component transcriptional regulator, LuxR family  31.82 
 
 
212 aa  61.2  0.00000001  Nakamurella multipartita DSM 44233  Bacteria  normal  0.172206  hitchhiker  0.00394331 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  31.5 
 
 
228 aa  61.2  0.00000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0728  two component LuxR family transcriptional regulator  29.38 
 
 
217 aa  60.8  0.00000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2814  LuxR family transcriptional regulator  45.74 
 
 
146 aa  60.8  0.00000002  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0940527 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  29.61 
 
 
217 aa  60.8  0.00000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_4527  two component transcriptional regulator, LuxR family  28.43 
 
 
223 aa  60.1  0.00000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.658241 
 
 
-
 
NC_010571  Oter_0370  two component LuxR family transcriptional regulator  34.96 
 
 
214 aa  59.7  0.00000004  Opitutus terrae PB90-1  Bacteria  normal  normal  0.273913 
 
 
-
 
NC_014158  Tpau_0915  two component transcriptional regulator, LuxR family  54.39 
 
 
223 aa  59.7  0.00000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  28.24 
 
 
218 aa  59.7  0.00000004  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  28.24 
 
 
218 aa  59.7  0.00000004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  33.33 
 
 
217 aa  59.7  0.00000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  28.38 
 
 
221 aa  59.3  0.00000005  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  32.62 
 
 
228 aa  59.7  0.00000005  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  53.33 
 
 
212 aa  59.3  0.00000006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1148  regulatory protein LuxR  51.67 
 
 
921 aa  59.3  0.00000006  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.108504  normal 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  30.6 
 
 
213 aa  59.3  0.00000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1062  transcriptional regulator, LuxR family  43.75 
 
 
234 aa  58.9  0.00000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  31.25 
 
 
215 aa  58.9  0.00000007  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  28.11 
 
 
229 aa  58.9  0.00000007  Opitutus terrae PB90-1  Bacteria  normal  normal  0.460798 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  34.12 
 
 
225 aa  58.9  0.00000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  31.93 
 
 
215 aa  58.9  0.00000007  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_009719  Plav_2326  two component LuxR family transcriptional regulator  33.59 
 
 
210 aa  58.9  0.00000007  Parvibaculum lavamentivorans DS-1  Bacteria  normal  hitchhiker  0.000518478 
 
 
-
 
NC_008752  Aave_4229  two component LuxR family transcriptional regulator  33.17 
 
 
219 aa  58.9  0.00000007  Acidovorax citrulli AAC00-1  Bacteria  normal  0.720334  normal  0.28913 
 
 
-
 
NC_010623  Bphy_4331  two component LuxR family transcriptional regulator  29.34 
 
 
212 aa  58.5  0.00000008  Burkholderia phymatum STM815  Bacteria  normal  0.748519  normal 
 
 
-
 
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