| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0370 |
|---|
| Symbol | |
|---|
| ID | 6206273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 445825 |
|---|
| End bp | 446469 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641689992 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001817260 |
|---|
| Protein GI | 182412194 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.273913 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGTCG AAGACCAGAC GGCGATTCGT CAGATGCTGG TGACGTTTGT GGCCGCGATG
CCGCGGTTTA CCGTCGTCGG TGAGGCCGGG AGCGTCGAGG AGGCGTTGCG GGTCGCCGAT
GCCACCCGCC CCCAGGTGGT GGTACTCGAC TGGATGTTGC TCGAGGGACT CGGGCTCGAG
TTTCTCCGGC AGGTGCGCAG CGATCCGCCG CCGCAAGTGC TCGTCTTTTC GGCCAACACC
ACCGAACTGG CGGTGCGCGA GGCGCTTTCC GCCGGCGCGC GCGGCTACGT CGAGAAGACG
GCGAGTTTTT CCGAATTCAC CGCCGCATTG AATGCCGTCG CCGAGGGCCA GACCTACATC
GGCCCCGCCG TCGCGCGCGC TGTGCGGCGG ATGGCTGGCC ATCCAGAGCG GATCGATTCC
AAACTGGATA TCTCCACCCG TGAACGCGAC GTGCTGCGCT TCGTCGCGGA GGGGCTTTCG
TCCAAGGAGA TCGCGCAGCG GCTCGGCCTG AGCGTGCGCA CGGTCGAGAA CCATCGCGCG
AGCATCACGC GCCGGACGGG CCTGCGCTCC GTGGCGCAGC TGACGCTGCA TGCGGCCCGA
CTCGGGCTGG TGGAAGTGCC AGGCGGCAAG GAGCCGGGCG CATGA
|
|---|
| Protein sequence | MVVEDQTAIR QMLVTFVAAM PRFTVVGEAG SVEEALRVAD ATRPQVVVLD WMLLEGLGLE
FLRQVRSDPP PQVLVFSANT TELAVREALS AGARGYVEKT ASFSEFTAAL NAVAEGQTYI
GPAVARAVRR MAGHPERIDS KLDISTRERD VLRFVAEGLS SKEIAQRLGL SVRTVENHRA
SITRRTGLRS VAQLTLHAAR LGLVEVPGGK EPGA
|
|---|
| |