| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1062 |
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| Symbol | |
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| ID | 8357176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1270093 |
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| End bp | 1270797 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644963216 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003120761 |
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| Protein GI | 256420108 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGACAG ATTCGGACAT GGGCCAGAGC TATTCCCTCA ACGCCTTACA AAAGGAAAAT
GAACTGTTAA AGACCCGCAT CCAGTCACTG GAAAGTCTTT TAGACCATTT CCCCGCTATG
CTTTATACTC ACCAGAATAA TTCCAAAACG ATCAACTGGT GTAACCGCTA TATGGAAGAT
GTAACAGGAT ACACTTTAGC GGAAATGAAT AGCTTGGGAT TGGATTTCTT TAAAAAAGTC
ATGCATCCCG ATGATTTTGA ACTGGCTGTC ATAGCCCAAC AGTCGTTCAA AGAGAATAAG
AATGTATTTG GGGGAGTCTT GCGGTTTCGT AAACGGGGCG CCGAAAACTG GCGCTGGCTG
ACAGGCATTG CTATTCCTTA CAGCAGGGAT GAAGCCGGTG GTGTGAAAGA GGTGATCTGT
GCATTTGTAG ATATGACCAT GGCCATGGAT ACCAATGACC AGCTAACTGA AGCCATGCTG
GATGTCATGC GTCGTAAACA TGAAGATCTC ATCAGTAAAC TCACCCCGCG TGAGAAAGAT
ATTCTCAAAC TCACTGTAAA GGGATTGAAT AACAAAGAGA TAGCCGCTGA GTTAAATCTT
AGTCGTTATA CTATAGAAAC ACATCGTAAA AATATCCGGA TCAAGCTGAA AGTCCGTAAT
ACAACCGAAT TAATCGCTTT AGCAAGAAAG GTTGGTTATC AATAA
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| Protein sequence | MLTDSDMGQS YSLNALQKEN ELLKTRIQSL ESLLDHFPAM LYTHQNNSKT INWCNRYMED
VTGYTLAEMN SLGLDFFKKV MHPDDFELAV IAQQSFKENK NVFGGVLRFR KRGAENWRWL
TGIAIPYSRD EAGGVKEVIC AFVDMTMAMD TNDQLTEAML DVMRRKHEDL ISKLTPREKD
ILKLTVKGLN NKEIAAELNL SRYTIETHRK NIRIKLKVRN TTELIALARK VGYQ
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