More than 300 homologs were found in PanDaTox collection
for query gene Lcho_3485 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  100 
 
 
573 aa  1136    Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  52.94 
 
 
581 aa  513  1e-144  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  66.22 
 
 
579 aa  448  1.0000000000000001e-124  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_3767  methyl-accepting chemotaxis sensory transducer  47.19 
 
 
544 aa  435  1e-120  Delftia acidovorans SPH-1  Bacteria  normal  0.155197  normal  0.170651 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  59.57 
 
 
579 aa  426  1e-118  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  49.9 
 
 
613 aa  428  1e-118  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  45.86 
 
 
589 aa  423  1e-117  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  60.95 
 
 
542 aa  419  1e-116  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  63.68 
 
 
586 aa  419  9.999999999999999e-116  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  47.03 
 
 
594 aa  419  9.999999999999999e-116  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  65.1 
 
 
584 aa  418  9.999999999999999e-116  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  47.88 
 
 
583 aa  411  1e-113  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  74.5 
 
 
515 aa  407  1.0000000000000001e-112  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  46.46 
 
 
579 aa  408  1.0000000000000001e-112  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  47.99 
 
 
578 aa  408  1.0000000000000001e-112  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  70.68 
 
 
578 aa  405  1e-111  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  45.89 
 
 
554 aa  397  1e-109  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  49.81 
 
 
580 aa  396  1e-109  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  48.96 
 
 
596 aa  393  1e-108  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  63.8 
 
 
532 aa  391  1e-107  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  48.75 
 
 
557 aa  390  1e-107  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  49.16 
 
 
589 aa  389  1e-106  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  46.63 
 
 
552 aa  388  1e-106  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  47.6 
 
 
537 aa  388  1e-106  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  60.15 
 
 
592 aa  385  1e-106  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  64.31 
 
 
597 aa  384  1e-105  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  44.99 
 
 
553 aa  382  1e-104  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  43.93 
 
 
569 aa  377  1e-103  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  44.15 
 
 
618 aa  373  1e-102  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  46.53 
 
 
535 aa  372  1e-102  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  46.35 
 
 
511 aa  373  1e-102  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  46.79 
 
 
559 aa  370  1e-101  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  61.47 
 
 
527 aa  370  1e-101  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  45.37 
 
 
532 aa  367  1e-100  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  44.27 
 
 
634 aa  369  1e-100  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  58.52 
 
 
598 aa  368  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  44.27 
 
 
634 aa  369  1e-100  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  48.02 
 
 
536 aa  365  1e-99  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  55.16 
 
 
614 aa  364  3e-99  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  55.15 
 
 
585 aa  363  4e-99  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0285  methyl-accepting chemotaxis protein  61.43 
 
 
563 aa  363  4e-99  Burkholderia pseudomallei 1106a  Bacteria  normal  0.877776  n/a   
 
 
-
 
NC_006349  BMAA1872  methyl-accepting chemotaxis protein  61.93 
 
 
542 aa  363  6e-99  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A2146  methyl-accepting chemotaxis protein  61.93 
 
 
542 aa  363  6e-99  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1169  methyl-accepting chemotaxis protein  61.93 
 
 
542 aa  363  6e-99  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  65.91 
 
 
539 aa  363  6e-99  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  49.15 
 
 
537 aa  363  6e-99  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_008752  Aave_4495  methyl-accepting chemotaxis sensory transducer  45.52 
 
 
605 aa  363  7.0000000000000005e-99  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0928828 
 
 
-
 
NC_008784  BMASAVP1_0881  methyl-accepting chemotaxis protein  61.76 
 
 
661 aa  362  9e-99  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  57.98 
 
 
559 aa  362  1e-98  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008752  Aave_4446  methyl-accepting chemotaxis sensory transducer  45.26 
 
 
605 aa  361  2e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0260008  normal  0.622584 
 
 
-
 
NC_012912  Dd1591_4047  methyl-accepting chemotaxis sensory transducer  42.27 
 
 
559 aa  361  2e-98  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0110  methyl-accepting chemotaxis sensory transducer  41.77 
 
 
548 aa  360  3e-98  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.975087  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  52.11 
 
 
513 aa  360  3e-98  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  65.71 
 
 
471 aa  359  6e-98  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_012880  Dd703_3864  methyl-accepting chemotaxis sensory transducer  40.84 
 
 
543 aa  360  6e-98  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  44.38 
 
 
573 aa  359  7e-98  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_007435  BURPS1710b_A1733  methyl-accepting chemotaxis protein I  61.47 
 
 
661 aa  358  9.999999999999999e-98  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0379  methyl-accepting chemotaxis protein  60.88 
 
 
542 aa  358  9.999999999999999e-98  Burkholderia pseudomallei 668  Bacteria  normal  0.366227  n/a   
 
 
-
 
NC_013421  Pecwa_0106  methyl-accepting chemotaxis sensory transducer  38.97 
 
 
556 aa  359  9.999999999999999e-98  Pectobacterium wasabiae WPP163  Bacteria  normal  0.405526  n/a   
 
 
-
 
NC_013421  Pecwa_0107  methyl-accepting chemotaxis sensory transducer  42.75 
 
 
559 aa  358  1.9999999999999998e-97  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2548  methyl-accepting chemotaxis protein  59.42 
 
 
525 aa  357  2.9999999999999997e-97  Methylibium petroleiphilum PM1  Bacteria  decreased coverage  0.00975221  normal  0.500866 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  57.91 
 
 
559 aa  357  2.9999999999999997e-97  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_012912  Dd1591_4046  methyl-accepting chemotaxis sensory transducer  41.21 
 
 
560 aa  357  2.9999999999999997e-97  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  46.15 
 
 
513 aa  357  3.9999999999999996e-97  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0104  methyl-accepting chemotaxis sensory transducer  41.19 
 
 
548 aa  357  3.9999999999999996e-97  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  58.11 
 
 
519 aa  356  5.999999999999999e-97  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_0113  methyl-accepting chemotaxis sensory transducer  44.53 
 
 
559 aa  355  1e-96  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  44.21 
 
 
558 aa  355  1e-96  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  49.36 
 
 
584 aa  355  2e-96  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  49.68 
 
 
547 aa  354  2.9999999999999997e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_008752  Aave_0772  methyl-accepting chemotaxis sensory transducer  49.58 
 
 
612 aa  352  7e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  0.343543  normal  0.663369 
 
 
-
 
NC_012917  PC1_0112  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
556 aa  352  1e-95  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  65.7 
 
 
642 aa  352  1e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  61.88 
 
 
566 aa  351  2e-95  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  61.31 
 
 
519 aa  351  2e-95  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_012917  PC1_0111  methyl-accepting chemotaxis sensory transducer  53.2 
 
 
556 aa  351  2e-95  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6240  chemotaxis sensory transducer  43.5 
 
 
556 aa  350  4e-95  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_0105  methyl-accepting chemotaxis sensory transducer  39.69 
 
 
556 aa  350  4e-95  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0742  methyl-accepting chemotaxis sensory transducer  55.22 
 
 
581 aa  350  5e-95  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  60.8 
 
 
520 aa  348  1e-94  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  51.7 
 
 
580 aa  348  1e-94  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  43.09 
 
 
572 aa  348  2e-94  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  64.65 
 
 
653 aa  348  2e-94  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  64.65 
 
 
653 aa  347  3e-94  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  65.81 
 
 
589 aa  347  3e-94  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  54.93 
 
 
598 aa  346  6e-94  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  57.34 
 
 
550 aa  345  8.999999999999999e-94  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.38 
 
 
515 aa  345  1e-93  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  59.38 
 
 
515 aa  345  1e-93  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012912  Dd1591_4048  methyl-accepting chemotaxis sensory transducer  41.24 
 
 
542 aa  345  2e-93  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  56.81 
 
 
579 aa  344  2e-93  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  44.64 
 
 
576 aa  344  2e-93  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_010622  Bphy_1586  methyl-accepting chemotaxis sensory transducer  44.4 
 
 
553 aa  343  4e-93  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II2191  methyl-accepting chemotaxis protein  60.06 
 
 
666 aa  343  4e-93  Burkholderia thailandensis E264  Bacteria  normal  0.918882  n/a   
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  57.07 
 
 
550 aa  343  5e-93  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3862  methyl-accepting chemotaxis sensory transducer  42.48 
 
 
555 aa  343  5e-93  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0137  methyl-accepting chemotaxis sensory transducer  44.08 
 
 
515 aa  343  7e-93  Burkholderia phymatum STM815  Bacteria  normal  0.5368  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  43.31 
 
 
543 aa  342  1e-92  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  42.7 
 
 
549 aa  341  2e-92  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  61.75 
 
 
521 aa  341  2e-92  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
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