More than 300 homologs were found in PanDaTox collection
for query gene Franean1_2216 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009921  Franean1_2216  two component LuxR family transcriptional regulator  100 
 
 		 211 aa  413  1e-114  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00683516  normal  0.0356101 
 
 
-
 
NC_007777  Francci3_1680  two component LuxR family transcriptional regulator  70.05 
 
 		 229 aa  248  3e-65  Frankia sp. CcI3  Bacteria  normal  0.128873  normal  0.734397 
 
 
-
 
NC_009953  Sare_3939  two component LuxR family transcriptional regulator  42.93 
 
 		 229 aa  135  4e-31  Salinispora arenicola CNS-205  Bacteria  normal  0.203044  normal  0.164365 
 
 
-
 
NC_009664  Krad_1090  two component transcriptional regulator, LuxR family  41.04 
 
 		 224 aa  121  9e-27  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.00274111  normal  1 
 
 
-
 
NC_014151  Cfla_0049  two component transcriptional regulator, LuxR family  36.54 
 
 		 233 aa  120  9.999999999999999e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0384611  normal  0.0476146 
 
 
-
 
NC_013093  Amir_1881  two component transcriptional regulator, LuxR family  34.15 
 
 		 260 aa  106  3e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_0796  two component LuxR family transcriptional regulator  30.84 
 
 		 237 aa  97.4  1e-19  Mycobacterium sp. JLS  Bacteria  normal  0.203345  normal  1 
 
 
-
 
NC_013235  Namu_4835  response regulator receiver protein  40.1 
 
 		 212 aa  95.9  4e-19  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_3724  response regulator receiver  36.41 
 
 		 231 aa  92.8  4e-18  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_3153  two component transcriptional regulator, LuxR family  34.34 
 
 		 224 aa  90.1  2e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.620598 
 
 
-
 
NC_008146  Mmcs_3350  two component LuxR family transcriptional regulator  31.1 
 
 		 227 aa  89  5e-17  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_3412  two component LuxR family transcriptional regulator  31.1 
 
 		 227 aa  89  5e-17  Mycobacterium sp. KMS  Bacteria  normal  0.386741  normal  0.724713 
 
 
-
 
NC_009077  Mjls_3361  two component LuxR family transcriptional regulator  31.1 
 
 		 227 aa  89  5e-17  Mycobacterium sp. JLS  Bacteria  normal  0.295921  normal  0.602395 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  33.83 
 
 		 215 aa  87.8  1e-16  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B3667  two component LuxR family transcriptional regulator  31.31 
 
 		 215 aa  85.9  4e-16  Ralstonia eutropha JMP134  Bacteria  normal  0.849529  n/a   
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  31.58 
 
 		 215 aa  85.9  4e-16  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal  1 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  32.84 
 
 		 215 aa  85.1  7e-16  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  32.84 
 
 		 215 aa  84.3  0.000000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  32.84 
 
 		 215 aa  84.3  0.000000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  32.84 
 
 		 215 aa  84.3  0.000000000000001  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  32.84 
 
 		 215 aa  84.3  0.000000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  32.84 
 
 		 215 aa  84.7  0.000000000000001  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  33.33 
 
 		 209 aa  84.7  0.000000000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  32.84 
 
 		 215 aa  84.3  0.000000000000001  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  32.84 
 
 		 215 aa  83.6  0.000000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  32.34 
 
 		 215 aa  83.2  0.000000000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  30.59 
 
 		 221 aa  82.8  0.000000000000004  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  32.54 
 
 		 228 aa  82  0.000000000000006  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  34.63 
 
 		 206 aa  82  0.000000000000006  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  32.52 
 
 		 217 aa  81.6  0.000000000000007  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  32.88 
 
 		 217 aa  81.6  0.000000000000009  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_008726  Mvan_1515  two component LuxR family transcriptional regulator  27.83 
 
 		 226 aa  81.3  0.00000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.217252  normal  0.561085 
 
 
-
 
NC_013093  Amir_7055  two component transcriptional regulator, LuxR family  33.18 
 
 		 219 aa  81.3  0.00000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  31.55 
 
 		 238 aa  80.1  0.00000000000002  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_011758  Mchl_5446  two component transcriptional regulator, LuxR family  32.8 
 
 		 218 aa  79.7  0.00000000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.26634  normal  1 
 
 
-
 
NC_006348  BMA1034  DNA-binding response regulator  30.14 
 
 		 221 aa  79.7  0.00000000000003  Burkholderia mallei ATCC 23344  Bacteria  normal  0.315998  n/a   
 
 
-
 
NC_007434  BURPS1710b_2225  DNA-binding response regulator  30.14 
 
 		 221 aa  79.7  0.00000000000003  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  32.97 
 
 		 219 aa  79.7  0.00000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  32.97 
 
 		 215 aa  79.7  0.00000000000003  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009074  BURPS668_2022  DNA-binding response regulator  30.14 
 
 		 221 aa  79.7  0.00000000000003  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009076  BURPS1106A_2078  LuxR family DNA-binding response regulator  30.14 
 
 		 221 aa  79.7  0.00000000000003  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_4158  two component transcriptional regulator, LuxR family  33.83 
 
 		 216 aa  79.3  0.00000000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.962754  normal  1 
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  32.97 
 
 		 219 aa  79.3  0.00000000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_009953  Sare_3511  two component LuxR family transcriptional regulator  34.76 
 
 		 221 aa  79  0.00000000000005  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0444635 
 
 
-
 
NC_009380  Strop_3279  response regulator receiver  34.76 
 
 		 221 aa  79  0.00000000000005  Salinispora tropica CNB-440  Bacteria  normal  0.97215  normal  1 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  31.41 
 
 		 207 aa  79  0.00000000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_4965  two component LuxR family transcriptional regulator  31.8 
 
 		 214 aa  78.2  0.00000000000008  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.122556 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  32.16 
 
 		 225 aa  77.8  0.0000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  31.03 
 
 		 250 aa  77.4  0.0000000000001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  34.13 
 
 		 222 aa  77.8  0.0000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  29.95 
 
 		 221 aa  77  0.0000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_010553  BamMC406_6653  two component LuxR family transcriptional regulator  28.57 
 
 		 238 aa  77  0.0000000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.879715  hitchhiker  0.00000102566 
 
 
-
 
NC_007974  Rmet_3986  two component LuxR family transcriptional regulator  29.68 
 
 		 217 aa  76.6  0.0000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.039666 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  30.2 
 
 		 303 aa  76.6  0.0000000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_009523  RoseRS_3278  two component LuxR family transcriptional regulator  30.88 
 
 		 214 aa  77  0.0000000000002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.749326 
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  31.94 
 
 		 207 aa  76.6  0.0000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal  1 
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  32.49 
 
 		 212 aa  77  0.0000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  34.98 
 
 		 213 aa  77  0.0000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.624898 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.16 
 
 		 216 aa  76.6  0.0000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.657091 
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  31.22 
 
 		 206 aa  76.6  0.0000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  hitchhiker  0.00252848 
 
 
-
 
NC_013441  Gbro_1737  regulatory protein LuxR  34.31 
 
 		 231 aa  76.6  0.0000000000003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.117285  n/a   
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  33.14 
 
 		 207 aa  76.3  0.0000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal  1 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  32.35 
 
 		 219 aa  76.3  0.0000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.45 
 
 		 239 aa  76.3  0.0000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.711047 
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  33.18 
 
 		 212 aa  76.6  0.0000000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  30.35 
 
 		 208 aa  75.9  0.0000000000004  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_013441  Gbro_4304  response regulator receiver  30.88 
 
 		 216 aa  75.9  0.0000000000004  Gordonia bronchialis DSM 43247  Bacteria  normal  0.894661  n/a   
 
 
-
 
NC_010515  Bcenmc03_5459  two component LuxR family transcriptional regulator  30.2 
 
 		 225 aa  75.9  0.0000000000004  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.953036  normal  0.183697 
 
 
-
 
NC_009767  Rcas_3763  two component LuxR family transcriptional regulator  31.03 
 
 		 221 aa  75.9  0.0000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0403461 
 
 
-
 
NC_009620  Smed_4344  two component LuxR family transcriptional regulator  31.16 
 
 		 219 aa  75.5  0.0000000000005  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.218307 
 
 
-
 
NC_013441  Gbro_2881  response regulator receiver  33.7 
 
 		 220 aa  75.9  0.0000000000005  Gordonia bronchialis DSM 43247  Bacteria  decreased coverage  0.00126066  n/a   
 
 
-
 
NC_013595  Sros_1936  response regulator receiver protein  29.8 
 
 		 205 aa  75.9  0.0000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  31.31 
 
 		 222 aa  74.7  0.0000000000008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_03853  transcriptional regulator NarL  29.44 
 
 		 217 aa  74.3  0.000000000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000020037  n/a   
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  31.98 
 
 		 215 aa  74.7  0.000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  31.25 
 
 		 219 aa  74.3  0.000000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_009921  Franean1_6596  two component LuxR family transcriptional regulator  30.47 
 
 		 249 aa  74.3  0.000000000001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  32.82 
 
 		 218 aa  74.3  0.000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1229  response regulator receiver protein  33.98 
 
 		 212 aa  73.9  0.000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.643884  hitchhiker  0.00799583 
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  31.12 
 
 		 222 aa  73.6  0.000000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009783  VIBHAR_02748  response regulator  29.32 
 
 		 214 aa  73.6  0.000000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  32.61 
 
 		 207 aa  73.6  0.000000000002  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_0163  two component transcriptional regulator, LuxR family  33.68 
 
 		 213 aa  73.6  0.000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.107009  normal  1 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  29.38 
 
 		 217 aa  73.6  0.000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  29.2 
 
 		 220 aa  72.8  0.000000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  34.02 
 
 		 210 aa  72.8  0.000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  30.66 
 
 		 237 aa  73.2  0.000000000003  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_013457  VEA_000091  transcriptional regulatory protein UhpA  29.61 
 
 		 202 aa  73.2  0.000000000003  Vibrio sp. Ex25  Bacteria  normal  0.136186  n/a   
 
 
-
 
NC_008752  Aave_4382  two component LuxR family transcriptional regulator  31.96 
 
 		 209 aa  73.2  0.000000000003  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010084  Bmul_0030  two component LuxR family transcriptional regulator  27.4 
 
 		 229 aa  72.4  0.000000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4229  two component LuxR family transcriptional regulator  33.7 
 
 		 215 aa  72.8  0.000000000004  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00851836  normal  1 
 
 
-
 
NC_007974  Rmet_4235  two component LuxR family transcriptional regulator  33.7 
 
 		 215 aa  72.8  0.000000000004  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008541  Arth_4147  two component LuxR family transcriptional regulator  30 
 
 		 218 aa  72.8  0.000000000004  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_2900  transcriptional regulator NarL  30.11 
 
 		 216 aa  72.4  0.000000000004  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_1435  two component LuxR family transcriptional regulator  30.85 
 
 		 218 aa  72.4  0.000000000005  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_1953  response regulator  28.65 
 
 		 214 aa  72.4  0.000000000005  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00404481  n/a   
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  30.05 
 
 		 237 aa  72  0.000000000006  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  32.37 
 
 		 216 aa  72  0.000000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_0027  DNA-binding transcriptional activator UhpA  31.28 
 
 		 197 aa  72  0.000000000006  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_0563  two component LuxR family transcriptional regulator  31.61 
 
 		 209 aa  72  0.000000000006  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
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