| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_2078 |
|---|
| Symbol | |
|---|
| ID | 4902036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 2073631 |
|---|
| End bp | 2074296 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640135308 |
|---|
| Product | LuxR family DNA-binding response regulator |
|---|
| Protein accession | YP_001066343 |
|---|
| Protein GI | 126454876 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACG TTGCCCTGCA TACAAGAAAA GTCGTCGTGG CCGACGATCA TCCGATCGTC
CTGCGTGCGG TGACGGATTA CGTCAATTCG CTGCCGGGTT TTCACGTCGT GGCGTCGGTT
TCGTCGGGGG ACGCGCTGTT GTCCGCGATG CGGGAGCAGG AGGTCAATCT CGTCGTGACC
GATTTCACGA TGCATCAGGC GAACGACGAC AAGGACGGCT TGCGCTTGAT CTCGCACCTG
ATGAGGGCGT ACGAGCGCAC GCCGATCATC GTGTTCACGA TGCTGACCAA TAGCGGCGTG
ATCAGCCAGC TGTGCCGCAT GGGCGTGGCG GGGCTCGTCG GCAAGGAGGA GGAGATCGCC
GAGCTCGGGC GCGTATGCGT GAGCGTGGCG CGCGGCGTCA GCCAATCGTT GTCGCCCGGC
ATGGCTCACC GGCTTGCCGC CGTCGGCAGC ATCAGGCCGG GCGAGGCGGC ATTCAACGCG
TTGACGCCGA AGGAACTGGA GGTCGTGCGG CTGTTTACGG GCGGCATGTC GCTCACGGAC
ATCGCGCGCA CGCTGAATCG CTCGCTCGGG ACCGTGTCGA CGCAGAAGCG CTCGGCCATG
CGCAAGCTGC ACGTGGACAC CAACGTCGAT CTCATCAACT GCGCCCGCGA GCAAGGACTG
CTCTGA
|
|---|
| Protein sequence | MSNVALHTRK VVVADDHPIV LRAVTDYVNS LPGFHVVASV SSGDALLSAM REQEVNLVVT
DFTMHQANDD KDGLRLISHL MRAYERTPII VFTMLTNSGV ISQLCRMGVA GLVGKEEEIA
ELGRVCVSVA RGVSQSLSPG MAHRLAAVGS IRPGEAAFNA LTPKELEVVR LFTGGMSLTD
IARTLNRSLG TVSTQKRSAM RKLHVDTNVD LINCAREQGL L
|
|---|
| |