| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4965 |
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| Symbol | |
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| ID | 4041827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1636243 |
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| End bp | 1636887 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637980386 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_587096 |
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| Protein GI | 94313887 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.122556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAGG TACTAATTGC CGACGATCAC CCGGTAGTCG TCAATGGCAT CCGTAGAGAA
CTAGGTGACG AGGTTGGGTT TGAAGTCGTT GGCACGGCGC ATAGCTCCAC CGAGCTGCTG
CGTCTGCTCG ACACCACCCA GTGCGATGTG CTGGTGACCG ACTATTCCAT GCCGGGGAGT
GCGACTGGCG ACGGCTTGCC GATGCTGCAG TTGATTCGCA GGCGCCATCC GGCCGTACGC
ATTGTCGTGA TCACGATGCT CGACAATCCC GCCCTGCTGC GGAACATTCA GAAGGCAGGC
ATCTCGGTGA TCCTGAGCAA GTCCGATCAC CTTGGCCATC TCGCCCCCGC GATCCGGGCG
GCCTTCGTCG GTATCGCTTA TCTGGCGCCT GCGGTGCAGG CGTTGCTCGG CGATGCCAGC
GACGACGGCG GCGCGCCGGA GCCAAAGCTC TCGAAGCGGG AACTGGAGGT CGTGCGCAAA
TGCGCGGCTG GTGTGCCCCT GGTCGAGATC GCCCGGCAGG CCAATCGCAG CAGCAAGACC
ATCAGCGCCC AGAAGAGCAT GGCGATGCGC AAGCTGGGTC TGACATCGGA TTACGAGCTT
TATCAGTACG CCGTCACCCA CGGCATGCTT GCGGCCGCCC AGTAA
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| Protein sequence | MIQVLIADDH PVVVNGIRRE LGDEVGFEVV GTAHSSTELL RLLDTTQCDV LVTDYSMPGS
ATGDGLPMLQ LIRRRHPAVR IVVITMLDNP ALLRNIQKAG ISVILSKSDH LGHLAPAIRA
AFVGIAYLAP AVQALLGDAS DDGGAPEPKL SKRELEVVRK CAAGVPLVEI ARQANRSSKT
ISAQKSMAMR KLGLTSDYEL YQYAVTHGML AAAQ
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