| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6653 |
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| Symbol | |
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| ID | 6181701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010553 |
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| Strand | - |
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| Start bp | 148870 |
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| End bp | 149586 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641685408 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001812313 |
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| Protein GI | 172064663 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.879715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000102566 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGGCCAA CGCACCAGCC GATTCAGGTC GTGATTCTGG ACGACCATGC GGTCGTTCAG
CACGGGCTTG CCACTTACCT GACGGAGAAG GCCGACATCG AAGTGGCGGC AAGCTTCGCG
AAGTCGCGTG ATTTGATCCG CTGGCTCCAA GCGCATCACG CCGATGTCGT GATGCTCGAC
TACACGCTCG GCCCCGGAGA GATCGACGGG CTGAATCTCG TCAAGCTCAT CGATACGCGC
TTTCCGAAGT GCCGGATCCT GATGATGTCG AGCAGCGATA CGCCGGCGAC CGTCAACATG
ACGATGCGGG CAGGCGCGCT CGGCTTCTTC GGCAAGAGCG AAGATCTCGG TGCGCTTGCG
CATGCGATCC GCGTCGTCGC GAACGGCCGT CCGTACATTA GCGCCAAACT GGCTGCACGG
ATGGAGTTGC GCGCGACACC CGAGCGGCAC GTAACCGAGA CGAAGACGCC GAGCCCCGAT
GTCTCGCTTG CAGGCGACGC CGCATCGGCC GCGAACCTGC GGCTCAGCCC GCGTGAGCAC
GAGGTACTGC GCTGCTTTCT TGCCGGTATG TCCGTATCCG ACATAGCGTC GAAGTTTTCT
CGCAGCCCCA AGACGATCAG CGCGCAAAAG CAATCGGCAT TTCGCAAACT CGGAATCTGC
AGCGATGCGG AACTTTTCGC GTCCCGCAAG CTGATCGAGG AAGCTAGCAC TTCCTGA
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| Protein sequence | MRPTHQPIQV VILDDHAVVQ HGLATYLTEK ADIEVAASFA KSRDLIRWLQ AHHADVVMLD
YTLGPGEIDG LNLVKLIDTR FPKCRILMMS SSDTPATVNM TMRAGALGFF GKSEDLGALA
HAIRVVANGR PYISAKLAAR MELRATPERH VTETKTPSPD VSLAGDAASA ANLRLSPREH
EVLRCFLAGM SVSDIASKFS RSPKTISAQK QSAFRKLGIC SDAELFASRK LIEEASTS
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