More than 300 homologs were found in PanDaTox collection
for query gene Cphy_1636 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_1636  methyl-accepting chemotaxis sensory transducer  100 
 
 
456 aa  926    Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000322642  n/a   
 
 
-
 
NC_010001  Cphy_0614  methyl-accepting chemotaxis sensory transducer  28.61 
 
 
429 aa  162  2e-38  Clostridium phytofermentans ISDg  Bacteria  normal  0.0371385  n/a   
 
 
-
 
NC_009485  BBta_5250  hypothetical protein  26.33 
 
 
466 aa  125  1e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.869882  normal  0.134387 
 
 
-
 
NC_009483  Gura_0375  methyl-accepting chemotaxis sensory transducer  23.44 
 
 
674 aa  124  4e-27  Geobacter uraniireducens Rf4  Bacteria  normal  0.129925  n/a   
 
 
-
 
NC_010814  Glov_3525  methyl-accepting chemotaxis sensory transducer  27.44 
 
 
658 aa  123  6e-27  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0383  methyl-accepting chemotaxis sensory transducer  25.16 
 
 
700 aa  120  3.9999999999999996e-26  Geobacter bemidjiensis Bem  Bacteria  normal  0.424843  n/a   
 
 
-
 
NC_002939  GSU1032  methyl-accepting chemotaxis protein  24.11 
 
 
645 aa  120  4.9999999999999996e-26  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0365  methyl-accepting chemotaxis sensory transducer  25.82 
 
 
700 aa  117  3e-25  Geobacter sp. M21  Bacteria  n/a    normal  0.0784998 
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  24.23 
 
 
664 aa  117  3.9999999999999997e-25  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_012029  Hlac_1861  methyl-accepting chemotaxis sensory transducer  30.52 
 
 
505 aa  116  8.999999999999998e-25  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.876271  normal  0.0686016 
 
 
-
 
NC_011830  Dhaf_4430  methyl-accepting chemotaxis sensory transducer  26.89 
 
 
641 aa  115  1.0000000000000001e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2165  methyl-accepting chemotaxis sensory transducer  24.15 
 
 
470 aa  114  4.0000000000000004e-24  Halorhodospira halophila SL1  Bacteria  normal  0.623772  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  31.36 
 
 
549 aa  112  1.0000000000000001e-23  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_013158  Huta_2382  methyl-accepting chemotaxis sensory transducer  32.56 
 
 
871 aa  112  1.0000000000000001e-23  Halorhabdus utahensis DSM 12940  Archaea  normal  0.115192  n/a   
 
 
-
 
NC_013922  Nmag_2884  methyl-accepting chemotaxis sensory transducer  31.67 
 
 
553 aa  112  1.0000000000000001e-23  Natrialba magadii ATCC 43099  Archaea  normal  0.244033  n/a   
 
 
-
 
NC_013201  Hmuk_3378  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
517 aa  112  2.0000000000000002e-23  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_002939  GSU0935  methyl-accepting chemotaxis protein, putative  29.46 
 
 
528 aa  109  1e-22  Geobacter sulfurreducens PCA  Bacteria  normal  0.220244  n/a   
 
 
-
 
NC_007604  Synpcc7942_0858  methyl-accepting chemotaxis sensory transducer with phytochrome sensor  25.96 
 
 
1406 aa  108  2e-22  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0185965  normal  0.079214 
 
 
-
 
NC_007778  RPB_3522  methyl-accepting chemotaxis sensory transducer  24.32 
 
 
471 aa  108  2e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.392623  normal  0.542302 
 
 
-
 
NC_013922  Nmag_2882  methyl-accepting chemotaxis sensory transducer  32.38 
 
 
526 aa  107  3e-22  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  25.31 
 
 
1170 aa  107  5e-22  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  31.22 
 
 
538 aa  107  5e-22  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_0889  methyl-accepting chemotaxis sensory transducer  35.84 
 
 
540 aa  106  7e-22  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
547 aa  106  9e-22  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013922  Nmag_2639  methyl-accepting chemotaxis sensory transducer  35.18 
 
 
864 aa  105  1e-21  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_011146  Gbem_0798  methyl-accepting chemotaxis sensory transducer  29.32 
 
 
541 aa  104  3e-21  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  29.95 
 
 
568 aa  104  3e-21  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.15 
 
 
624 aa  103  4e-21  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_009674  Bcer98_0367  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
580 aa  104  4e-21  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_0280  methyl-accepting chemotaxis sensory transducer  32.37 
 
 
329 aa  104  4e-21  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.240789  normal  0.07707 
 
 
-
 
NC_011772  BCG9842_B4882  methyl-accepting chemotaxis protein  30.05 
 
 
580 aa  103  5e-21  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_012029  Hlac_1029  methyl-accepting chemotaxis sensory transducer  28.42 
 
 
819 aa  103  5e-21  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.558162 
 
 
-
 
NC_011725  BCB4264_A0442  methyl-accepting chemotaxis protein  30.05 
 
 
580 aa  103  5e-21  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2424  methyl-accepting chemotaxis sensory transducer  31.46 
 
 
809 aa  103  5e-21  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.052407 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.61 
 
 
624 aa  103  8e-21  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_008609  Ppro_2152  methyl-accepting chemotaxis sensory transducer  28.2 
 
 
474 aa  103  8e-21  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000647381  n/a   
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  29.27 
 
 
569 aa  103  9e-21  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2825  methyl-accepting chemotaxis sensory transducer  29.39 
 
 
570 aa  103  9e-21  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000443347 
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.17 
 
 
632 aa  102  1e-20  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011662  Tmz1t_1988  methyl-accepting chemotaxis sensory transducer  33.92 
 
 
674 aa  102  1e-20  Thauera sp. MZ1T  Bacteria  normal  0.588025  n/a   
 
 
-
 
NC_002939  GSU0401  methyl-accepting chemotaxis protein, putative  33.92 
 
 
539 aa  102  2e-20  Geobacter sulfurreducens PCA  Bacteria  normal  0.395676  n/a   
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  32.61 
 
 
624 aa  102  2e-20  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  32.61 
 
 
624 aa  102  2e-20  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_009012  Cthe_2819  methyl-accepting chemotaxis sensory transducer  26.92 
 
 
1474 aa  102  2e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_3031  methyl-accepting chemotaxis sensory transducer  31.46 
 
 
297 aa  101  2e-20  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.100642 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  31 
 
 
625 aa  102  2e-20  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_008609  Ppro_0042  methyl-accepting chemotaxis sensory transducer  30.14 
 
 
565 aa  102  2e-20  Pelobacter propionicus DSM 2379  Bacteria  normal  0.121118  n/a   
 
 
-
 
NC_008609  Ppro_1221  methyl-accepting chemotaxis sensory transducer  29.53 
 
 
544 aa  102  2e-20  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000143655  n/a   
 
 
-
 
NC_013158  Huta_1186  methyl-accepting chemotaxis sensory transducer  27.97 
 
 
298 aa  101  3e-20  Halorhabdus utahensis DSM 12940  Archaea  normal  0.141917  n/a   
 
 
-
 
NC_013456  VEA_004525  methyl-accepting chemotaxis protein  29.23 
 
 
418 aa  101  3e-20  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  29.96 
 
 
484 aa  101  3e-20  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.42 
 
 
546 aa  101  3e-20  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011138  MADE_03785  methyl-accepting chemotaxis protein  23.85 
 
 
360 aa  100  4e-20  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  31.42 
 
 
541 aa  100  4e-20  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  30.94 
 
 
546 aa  100  5e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3322  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
539 aa  100  5e-20  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.910778 
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.67 
 
 
630 aa  100  5e-20  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  30.37 
 
 
547 aa  100  5e-20  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_007517  Gmet_0799  methyl-accepting chemotaxis sensory transducer  30.19 
 
 
388 aa  100  5e-20  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3323  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
539 aa  100  5e-20  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0142  methyl-accepting chemotaxis sensory transducer  28.9 
 
 
540 aa  100  5e-20  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0808523  n/a   
 
 
-
 
NC_009253  Dred_2760  methyl-accepting chemotaxis sensory transducer  32.14 
 
 
639 aa  100  5e-20  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2054  methyl-accepting chemotaxis sensory transducer  30.88 
 
 
539 aa  100  6e-20  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2933  histidine kinase, HAMP region: chemotaxis sensory transducer  32.56 
 
 
540 aa  100  6e-20  Dechloromonas aromatica RCB  Bacteria  decreased coverage  1.3489100000000001e-18  normal 
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  28.95 
 
 
550 aa  100  6e-20  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  27.31 
 
 
626 aa  100  6e-20  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_1637  methyl-accepting chemotaxis sensory transducer  35.46 
 
 
538 aa  100  7e-20  Pseudomonas putida W619  Bacteria  normal  0.662156  normal 
 
 
-
 
NC_011772  BCG9842_B1439  methyl-accepting chemotaxis protein  27.27 
 
 
571 aa  100  7e-20  Bacillus cereus G9842  Bacteria  normal  0.181327  hitchhiker  0.0000921474 
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.79 
 
 
526 aa  100  7e-20  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_2152  putative methyl-accepting chemotaxis sensory transducer  34.16 
 
 
655 aa  100  7e-20  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.697016  n/a   
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  31.72 
 
 
714 aa  100  7e-20  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_010814  Glov_2776  methyl-accepting chemotaxis sensory transducer  28.02 
 
 
544 aa  99.8  8e-20  Geobacter lovleyi SZ  Bacteria  normal  0.839191  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0921  methyl-accepting chemotaxis sensory transducer  26.91 
 
 
483 aa  99.8  9e-20  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  32.59 
 
 
561 aa  99.8  9e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_009831  Ssed_2309  methyl-accepting chemotaxis protein-like protein  29.91 
 
 
547 aa  99.8  9e-20  Shewanella sediminis HAW-EB3  Bacteria  normal  0.037772  hitchhiker  0.0000415162 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  37.33 
 
 
602 aa  99.8  9e-20  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  29.86 
 
 
533 aa  99.4  1e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2737  methyl-accepting chemotaxis sensory transducer  31.9 
 
 
452 aa  99.4  1e-19  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00060467  n/a   
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  36.57 
 
 
524 aa  99.4  1e-19  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  28.57 
 
 
566 aa  99.4  1e-19  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  27.94 
 
 
646 aa  99.8  1e-19  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_009654  Mmwyl1_2743  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
442 aa  99.4  1e-19  Marinomonas sp. MWYL1  Bacteria  normal  0.205923  normal 
 
 
-
 
NC_007796  Mhun_0347  methyl-accepting chemotaxis sensory transducer  26.52 
 
 
706 aa  99.4  1e-19  Methanospirillum hungatei JF-1  Archaea  normal  0.765539  normal  0.695737 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  28.45 
 
 
561 aa  99.4  1e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_007912  Sde_1108  putative methyl-accepting chemotaxis sensory transducer  30.4 
 
 
539 aa  99.4  1e-19  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  27.66 
 
 
545 aa  99.4  1e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  30.84 
 
 
629 aa  99.4  1e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_009712  Mboo_1248  methyl-accepting chemotaxis sensory transducer  32.08 
 
 
981 aa  99.4  1e-19  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.206477  normal 
 
 
-
 
NC_013739  Cwoe_0996  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.14 
 
 
823 aa  99.4  1e-19  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011313  VSAL_II0675  methyl-accepting chemotaxis protein  32.84 
 
 
542 aa  99  1e-19  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0486909  n/a   
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  28.85 
 
 
539 aa  99.4  1e-19  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  26.34 
 
 
549 aa  98.6  2e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2652  methyl-accepting chemotaxis protein  28.38 
 
 
392 aa  99  2e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2515  methyl-accepting chemotaxis sensory transducer  25.55 
 
 
833 aa  98.6  2e-19  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.0891124 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  30.37 
 
 
632 aa  98.6  2e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  30.37 
 
 
629 aa  98.6  2e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_011146  Gbem_0809  methyl-accepting chemotaxis sensory transducer  30.51 
 
 
532 aa  98.6  2e-19  Geobacter bemidjiensis Bem  Bacteria  normal  0.826751  n/a   
 
 
-
 
NC_009253  Dred_0384  methyl-accepting chemotaxis sensory transducer  37.66 
 
 
644 aa  98.6  2e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_32370  methyl-accepting chemotaxis protein  36.36 
 
 
531 aa  98.6  2e-19  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  28 
 
 
532 aa  99  2e-19  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
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