Gene Hmuk_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0280 
Symbol 
ID8409778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp274462 
End bp275451 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content67% 
IMG OID645018605 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003176124 
Protein GI257386351 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.240789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.07707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACA CCGAGCCCCG GGCGGAGCCG GACCTCTCGA CAGCCAGTGA TCTCGACGAG 
GACCTCGACA CGGACATCGA CGATCAGATC GAGCAGCGGG TGGATCGGCA GGCGGGCTAC
GACAACGACG CCGCCAGCGA GATCCAGACC TCGATCGCCG AACTGCAGGC GTCGTCCGAG
GATATCGCCC AAGAGGTCGA CGACATCCGC GGCCGGGCCG CCGAACAGCA CGAGGGGATG
AGCCAGATCG CCGAAGAGGT GTCGAACCTC AGCGCGGCCG TCGAGGAGAT CGCGTCTTCC
TCAGAACAGG TCTCGACGGC GACCGAGGAG GCGACGGCGC TGGCCGATCG GGGCCAGGAG
AACGCACAGG ACGTGTACGG CGCGATGGAG CGGATTCAGG GGGCCGCCGA CAGCGTGACC
GAAGACGTCC GAACGATCCA GCGAAGCGTC GCTGAGATCG ACGAGATCGT CGAGGTGATC
AACGACATCG CCGACCAGAC GAACATGCTG GCGCTCAACG CCTCCATCGA GGCCGCGCGT
GCCGGTGAAG CCGGCGAAGG CTTCGCGGTC GTCGCCGACG AAGTCAAGTC GCTCGCCGAA
CAGGCCCAGT CCGAGGCCAG CGAGATCGAG CAGATGGTCG GTCGCATCCA GGGCAACACC
GAAAACGCAG TCGACAGCCT CGAGACCTCC AACGCCGAGA TCGACGAGGG TATCGAGTCC
GTCGAGGAGT CCGTCGAGAT CTTGGACGAG ATCGGCGACG CGGTCCGGGA GGTCAACGAC
GGGATCGCGG AGGTCGCGAG CGCGACCGAC CAGCAGGCCG CCTCTACTGA GGAAGTCGCG
AGCATGGTCG ATCAGGCGAC GGCCGCCGCA GAGGAGATCG CCGAGTCGAC CGCCGCCATC
GCCGGGGAAG CCGACGACCA GACCGAACAG ATCGCAGACA TCAACCGCGC CGTCGACGAA
CTCGTCGCCG ACTGGCAGGC CCAGCGGTAG
 
Protein sequence
MSDTEPRAEP DLSTASDLDE DLDTDIDDQI EQRVDRQAGY DNDAASEIQT SIAELQASSE 
DIAQEVDDIR GRAAEQHEGM SQIAEEVSNL SAAVEEIASS SEQVSTATEE ATALADRGQE
NAQDVYGAME RIQGAADSVT EDVRTIQRSV AEIDEIVEVI NDIADQTNML ALNASIEAAR
AGEAGEGFAV VADEVKSLAE QAQSEASEIE QMVGRIQGNT ENAVDSLETS NAEIDEGIES
VEESVEILDE IGDAVREVND GIAEVASATD QQAASTEEVA SMVDQATAAA EEIAESTAAI
AGEADDQTEQ IADINRAVDE LVADWQAQR