More than 300 homologs were found in PanDaTox collection
for query gene Bind_2338 on replicon NC_010581
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010581  Bind_2338  short-chain dehydrogenase/reductase SDR  100 
 
 
263 aa  537  9.999999999999999e-153  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.288132 
 
 
-
 
NC_012560  Avin_16490  Short-chain dehydrogenase/reductase SDR  71.48 
 
 
263 aa  394  1e-109  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3370  short-chain dehydrogenase/reductase SDR  73.38 
 
 
262 aa  389  1e-107  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.363126  normal  0.172275 
 
 
-
 
NC_011369  Rleg2_3112  short-chain dehydrogenase/reductase SDR  74.14 
 
 
262 aa  382  1e-105  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.45905 
 
 
-
 
NC_011365  Gdia_2611  short-chain dehydrogenase/reductase SDR  74.14 
 
 
262 aa  379  1e-104  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0252898  normal 
 
 
-
 
NC_013730  Slin_0882  short-chain dehydrogenase/reductase SDR  37.97 
 
 
262 aa  163  2.0000000000000002e-39  Spirosoma linguale DSM 74  Bacteria  normal  0.845671  normal 
 
 
-
 
NC_013411  GYMC61_1799  short-chain dehydrogenase/reductase SDR  35.36 
 
 
261 aa  163  3e-39  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007963  Csal_2809  short-chain dehydrogenase/reductase SDR  37.83 
 
 
264 aa  160  2e-38  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.53126  n/a   
 
 
-
 
NC_009956  Dshi_3903  short-chain dehydrogenase/reductase SDR  36.33 
 
 
265 aa  159  5e-38  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.60133 
 
 
-
 
NC_013132  Cpin_4318  short-chain dehydrogenase/reductase SDR  38.35 
 
 
264 aa  157  2e-37  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.319531  normal  0.0832513 
 
 
-
 
NC_007760  Adeh_2760  short-chain dehydrogenase/reductase SDR  37.82 
 
 
256 aa  154  1e-36  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  hitchhiker  0.0058487  n/a   
 
 
-
 
NC_009674  Bcer98_1545  short-chain dehydrogenase/reductase SDR  34.98 
 
 
261 aa  154  1e-36  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00435006  n/a   
 
 
-
 
NC_013205  Aaci_0216  short-chain dehydrogenase/reductase SDR  36.88 
 
 
260 aa  153  2e-36  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0758  short-chain dehydrogenase/reductase SDR  34.22 
 
 
262 aa  151  1e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013757  Gobs_3777  short-chain dehydrogenase/reductase SDR  35.23 
 
 
262 aa  150  2e-35  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009073  Pcal_0013  short-chain dehydrogenase/reductase SDR  37.11 
 
 
260 aa  150  2e-35  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_013501  Rmar_2036  short-chain dehydrogenase/reductase SDR  37.31 
 
 
258 aa  149  5e-35  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2852  short-chain dehydrogenase/reductase SDR  37.32 
 
 
256 aa  148  8e-35  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4560  short-chain dehydrogenase/reductase SDR  37.69 
 
 
268 aa  148  8e-35  Methylobacterium populi BJ001  Bacteria  normal  normal  0.62458 
 
 
-
 
NC_012793  GWCH70_0923  short-chain dehydrogenase/reductase SDR  32.33 
 
 
261 aa  147  1.0000000000000001e-34  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2944  short-chain dehydrogenase/reductase SDR  37.32 
 
 
256 aa  147  1.0000000000000001e-34  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_2667  3-oxoacyl-(acyl-carrier-protein) reductase  34.23 
 
 
249 aa  147  1.0000000000000001e-34  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.000000000680764  n/a   
 
 
-
 
NC_011894  Mnod_7299  short-chain dehydrogenase/reductase SDR  38.02 
 
 
260 aa  147  1.0000000000000001e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3337  short-chain dehydrogenase/reductase SDR  36.53 
 
 
267 aa  146  3e-34  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.964929 
 
 
-
 
NC_009675  Anae109_2033  short-chain dehydrogenase/reductase SDR  37.04 
 
 
256 aa  146  3e-34  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  hitchhiker  0.00849421 
 
 
-
 
NC_009441  Fjoh_3849  short chain dehydrogenase  34.44 
 
 
260 aa  145  5e-34  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_0110  short-chain dehydrogenase/reductase SDR  34.2 
 
 
264 aa  144  1e-33  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.0585429 
 
 
-
 
NC_013131  Caci_3622  short-chain dehydrogenase/reductase SDR  37.69 
 
 
262 aa  144  1e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.154401  normal 
 
 
-
 
NC_013162  Coch_1303  short-chain dehydrogenase/reductase SDR  34.75 
 
 
258 aa  144  1e-33  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_012853  Rleg_5753  short-chain dehydrogenase/reductase SDR  35.58 
 
 
264 aa  143  2e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.83567  normal 
 
 
-
 
NC_010511  M446_5987  short-chain dehydrogenase/reductase SDR  37.26 
 
 
260 aa  143  3e-33  Methylobacterium sp. 4-46  Bacteria  normal  0.389039  normal  0.0700115 
 
 
-
 
NC_008463  PA14_46890  putative short-chain dehydrogenase  35.06 
 
 
264 aa  143  3e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000947706 
 
 
-
 
NC_007509  Bcep18194_C7138  short chain dehydrogenase  38.4 
 
 
260 aa  142  4e-33  Burkholderia sp. 383  Bacteria  normal  0.998532  normal 
 
 
-
 
NC_010525  Tneu_0044  short-chain dehydrogenase/reductase SDR  35.83 
 
 
259 aa  142  7e-33  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal  0.0333473 
 
 
-
 
NC_007778  RPB_2321  Short-chain dehydrogenase/reductase SDR  34.83 
 
 
264 aa  141  9e-33  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0737567  normal  0.413876 
 
 
-
 
NC_010505  Mrad2831_3521  short-chain dehydrogenase/reductase SDR  33.58 
 
 
265 aa  141  9.999999999999999e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA1331  short chain dehydrogenase  34.22 
 
 
265 aa  140  1.9999999999999998e-32  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4328  Short-chain dehydrogenase/reductase SDR  31.54 
 
 
294 aa  140  1.9999999999999998e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_0590  short chain dehydrogenase  34.22 
 
 
265 aa  140  1.9999999999999998e-32  Burkholderia mallei NCTC 10229  Bacteria  normal  0.155951  n/a   
 
 
-
 
NC_009079  BMA10247_A0977  short chain dehydrogenase  34.22 
 
 
265 aa  140  1.9999999999999998e-32  Burkholderia mallei NCTC 10247  Bacteria  normal  0.423513  n/a   
 
 
-
 
NC_008784  BMASAVP1_0314  short chain dehydrogenase  34.22 
 
 
265 aa  140  1.9999999999999998e-32  Burkholderia mallei SAVP1  Bacteria  normal  0.265928  n/a   
 
 
-
 
NC_009075  BURPS668_A1312  short chain dehydrogenase  34.22 
 
 
265 aa  140  3e-32  Burkholderia pseudomallei 668  Bacteria  normal  0.445214  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2499  short chain dehydrogenase  34.22 
 
 
265 aa  140  3e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  0.830572  n/a   
 
 
-
 
NC_009436  Ent638_3901  short-chain dehydrogenase/reductase SDR  32.34 
 
 
264 aa  140  3e-32  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A1239  short chain dehydrogenase  34.22 
 
 
265 aa  140  3e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  0.363004  n/a   
 
 
-
 
NC_009436  Ent638_0279  short chain dehydrogenase  36.57 
 
 
259 aa  140  3e-32  Enterobacter sp. 638  Bacteria  normal  0.946845  normal  0.64471 
 
 
-
 
NC_009376  Pars_0047  short-chain dehydrogenase/reductase SDR  36.33 
 
 
260 aa  139  3.9999999999999997e-32  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_007925  RPC_3421  short-chain dehydrogenase/reductase SDR  34.07 
 
 
264 aa  139  3.9999999999999997e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.126254 
 
 
-
 
NC_009654  Mmwyl1_0350  short chain dehydrogenase  34.83 
 
 
260 aa  139  3.9999999999999997e-32  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4447  short-chain dehydrogenase/reductase SDR  36.53 
 
 
268 aa  139  3.9999999999999997e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008701  Pisl_1089  short-chain dehydrogenase/reductase SDR  34.38 
 
 
260 aa  139  3.9999999999999997e-32  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_007777  Francci3_1239  short-chain dehydrogenase/reductase SDR  35.52 
 
 
259 aa  139  4.999999999999999e-32  Frankia sp. CcI3  Bacteria  normal  normal  0.198291 
 
 
-
 
NC_010725  Mpop_5269  3-hydroxybutyrate dehydrogenase  36.15 
 
 
261 aa  139  6e-32  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4368  short chain dehydrogenase  35.96 
 
 
259 aa  139  6e-32  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.494566  n/a   
 
 
-
 
NC_008543  Bcen2424_3998  short chain dehydrogenase  35.96 
 
 
259 aa  139  6e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  0.219529  normal  0.855518 
 
 
-
 
NC_013172  Bfae_31260  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like  34.83 
 
 
266 aa  139  7e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  0.974628  n/a   
 
 
-
 
NC_010172  Mext_4079  short-chain dehydrogenase/reductase SDR  36.53 
 
 
268 aa  139  7e-32  Methylobacterium extorquens PA1  Bacteria  normal  0.130432  normal 
 
 
-
 
NC_008752  Aave_3349  short chain dehydrogenase  36.8 
 
 
260 aa  138  7e-32  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2852  putative short-chain dehydrogenase/reductase  32.47 
 
 
264 aa  138  8.999999999999999e-32  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3128  short-chain dehydrogenase/reductase SDR  37.45 
 
 
263 aa  138  8.999999999999999e-32  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0549693 
 
 
-
 
NC_009675  Anae109_1636  short-chain dehydrogenase/reductase SDR  35.34 
 
 
263 aa  138  8.999999999999999e-32  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.35539  normal 
 
 
-
 
NC_013158  Huta_1623  short-chain dehydrogenase/reductase SDR  32.96 
 
 
261 aa  138  1e-31  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3482  3-hydroxybutyrate dehydrogenase  33.85 
 
 
261 aa  137  1e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.059744  normal  0.189597 
 
 
-
 
NC_010552  BamMC406_3582  short-chain dehydrogenase/reductase SDR  34.81 
 
 
266 aa  137  1e-31  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.30636 
 
 
-
 
NC_007650  BTH_II1496  short chain dehydrogenase  34.75 
 
 
260 aa  137  1e-31  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_1126  short-chain dehydrogenase/reductase SDR  32.58 
 
 
263 aa  137  1e-31  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.834586 
 
 
-
 
NC_007794  Saro_1750  3-hydroxybutyrate dehydrogenase  35.02 
 
 
261 aa  138  1e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.594296  n/a   
 
 
-
 
NC_013440  Hoch_5001  short-chain dehydrogenase/reductase SDR  34.85 
 
 
256 aa  137  1e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.46394 
 
 
-
 
NC_013037  Dfer_0878  short chain dehydrogenase  34.59 
 
 
261 aa  137  1e-31  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.787197  normal 
 
 
-
 
NC_009921  Franean1_0052  short-chain dehydrogenase/reductase SDR  35.91 
 
 
259 aa  137  2e-31  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3449  short-chain dehydrogenase/reductase SDR  36.8 
 
 
263 aa  137  2e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.637652  normal  0.978544 
 
 
-
 
NC_013501  Rmar_2206  short-chain dehydrogenase/reductase SDR  38.52 
 
 
266 aa  137  2e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  0.416605  n/a   
 
 
-
 
NC_008392  Bamb_6431  short-chain dehydrogenase/reductase SDR  35.47 
 
 
247 aa  137  2e-31  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.417621 
 
 
-
 
NC_009338  Mflv_0296  short-chain dehydrogenase/reductase SDR  36.7 
 
 
263 aa  136  3.0000000000000003e-31  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0501605 
 
 
-
 
NC_013132  Cpin_4238  short chain dehydrogenase  35.56 
 
 
264 aa  136  3.0000000000000003e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.210209  normal  0.968836 
 
 
-
 
NC_011989  Avi_1391  NAD/NADP dependent oxidoreductase  33.84 
 
 
261 aa  136  3.0000000000000003e-31  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1531  short-chain dehydrogenase/reductase SDR  33.94 
 
 
268 aa  137  3.0000000000000003e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.50523  normal 
 
 
-
 
NC_012850  Rleg_1090  short-chain dehydrogenase/reductase SDR  33.84 
 
 
262 aa  136  4e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.538623 
 
 
-
 
NC_010676  Bphyt_7064  short chain dehydrogenase  32.7 
 
 
265 aa  135  5e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal 
 
 
-
 
NC_011071  Smal_3694  short-chain dehydrogenase/reductase SDR  33.71 
 
 
264 aa  135  5e-31  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.595951 
 
 
-
 
NC_010320  Teth514_1783  3-ketoacyl-(acyl-carrier-protein) reductase  35.25 
 
 
255 aa  135  5e-31  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000332127  n/a   
 
 
-
 
NC_011894  Mnod_1310  short-chain dehydrogenase/reductase SDR  35.07 
 
 
265 aa  135  6.0000000000000005e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3588  hypothetical protein  38.85 
 
 
254 aa  135  6.0000000000000005e-31  Rhodobacter sphaeroides ATCC 17025  Bacteria  decreased coverage  0.00208776  normal  0.410255 
 
 
-
 
NC_011004  Rpal_3640  short-chain dehydrogenase/reductase SDR  33.71 
 
 
264 aa  135  6.0000000000000005e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0734919  n/a   
 
 
-
 
NC_010086  Bmul_3989  short chain dehydrogenase  33.08 
 
 
265 aa  135  6.0000000000000005e-31  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.826773  normal  0.0182099 
 
 
-
 
NC_010511  M446_0924  short-chain dehydrogenase/reductase SDR  35.45 
 
 
265 aa  135  7.000000000000001e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.434942 
 
 
-
 
NC_008554  Sfum_0112  short-chain dehydrogenase/reductase SDR  30.97 
 
 
263 aa  135  7.000000000000001e-31  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008688  Pden_4577  short chain dehydrogenase  34.6 
 
 
259 aa  135  7.000000000000001e-31  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.795837 
 
 
-
 
NC_007963  Csal_0789  short-chain dehydrogenase/reductase SDR  35.02 
 
 
291 aa  135  8e-31  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.608035  n/a   
 
 
-
 
NC_009379  Pnuc_1069  short-chain dehydrogenase/reductase SDR  33.71 
 
 
261 aa  135  9e-31  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.199007  n/a   
 
 
-
 
NC_009485  BBta_5043  putative short-chain dehydrogenase  32.96 
 
 
264 aa  135  9e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.239817  normal 
 
 
-
 
NC_011368  Rleg2_4589  short-chain dehydrogenase/reductase SDR  36.23 
 
 
254 aa  135  9.999999999999999e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.496264  normal 
 
 
-
 
NC_013595  Sros_3004  short chain dehydrogenase  34.19 
 
 
268 aa  134  9.999999999999999e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1866  short-chain dehydrogenase/reductase SDR  32.7 
 
 
265 aa  135  9.999999999999999e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5774  short-chain dehydrogenase/reductase SDR  35.9 
 
 
266 aa  134  9.999999999999999e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.798057  normal 
 
 
-
 
NC_011368  Rleg2_5145  short-chain dehydrogenase/reductase SDR  33.21 
 
 
263 aa  134  9.999999999999999e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.622858  normal  0.939609 
 
 
-
 
NC_008243  Meso_4522  short-chain dehydrogenase/reductase SDR  35.21 
 
 
261 aa  134  1.9999999999999998e-30  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4098  short chain dehydrogenase  32.32 
 
 
265 aa  133  1.9999999999999998e-30  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.474708 
 
 
-
 
NC_008541  Arth_1077  short-chain dehydrogenase/reductase SDR  35.79 
 
 
262 aa  134  1.9999999999999998e-30  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2852  putative oxidoreductase protein  33.83 
 
 
264 aa  134  1.9999999999999998e-30  Methylibium petroleiphilum PM1  Bacteria  normal  0.91402  normal 
 
 
-
 
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