| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1623 |
|---|
| Symbol | |
|---|
| ID | 8383902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 1604189 |
|---|
| End bp | 1604974 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644972684 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003130530 |
|---|
| Protein GI | 257052697 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGC AACTCGAGGG CAACGTCGCG CTGGCGACGG CCGCAACTAG CGGCCTCGGA
CTCGCGAGCG CCGAAGCACT CGCCGCGGAT GGTGCGAACG TCGTCGTCTG TGGCCGAACC
GCGGAACGGC TGGAATCCGC CCGCGAGCAA CTCGCGGCGG CAGGGCCGGG CGATGTCCGG
GCGATCGAGG CCGACATCAC CGATCCCGAT CACGTCGAGG CACTCGTCGC GGAGACCGTC
GAGACCTTCG GCGGGCTGGA TCACCTGGTC ACGAGCGCCG GCGGACCGCC GAGCGGGTCC
TTTCTCGATA CGCCGACCGA CGCCTGGTAC GACGCCTACG ACCTGTTGGT GATGAGCGCC
GTCCGGACGA CGCGGGCAGC CTACCCGCAC CTCAAAGAGA GCGACGTGGG ATCGATCGTC
AACATCACGT CCCGGTCGGT CCGGGAGGTC ATCGACGACC TCGTGCTCTC GAACGCGGTC
CGGCGGGCGG TCATCGGGCT GATGAAAACG CAGGCCCGGG AGTTCGCGCC GGACGTTCGC
GTCAACGCCG TCCTGCCCGG CGCACACGAG ACGGCCCGCA TCGAGGAACT GATCGACGAT
GCCGTCGAAC GTGGCGAGTA CGACAGCTAC GAGGAAGGCC TGGCAGACTG GGCGGCGGAC
GTTCCGATGG GTCGCATCGG CGAGCCGCGG GAACTCGGCG ACGTCGTTGC ATTCCTTTCA
AGTCCCCGGG CGAGTTTCCT GACGGGCGCG GCGATCCCGA TCGACGGCGG GTCGATGCGG
AGTTGA
|
|---|
| Protein sequence | MDLQLEGNVA LATAATSGLG LASAEALAAD GANVVVCGRT AERLESAREQ LAAAGPGDVR
AIEADITDPD HVEALVAETV ETFGGLDHLV TSAGGPPSGS FLDTPTDAWY DAYDLLVMSA
VRTTRAAYPH LKESDVGSIV NITSRSVREV IDDLVLSNAV RRAVIGLMKT QAREFAPDVR
VNAVLPGAHE TARIEELIDD AVERGEYDSY EEGLADWAAD VPMGRIGEPR ELGDVVAFLS
SPRASFLTGA AIPIDGGSMR S
|
|---|
| |