| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4098 |
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| Symbol | |
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| ID | 4312993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1021228 |
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| End bp | 1022025 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638151939 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_775985 |
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| Protein GI | 115358847 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.474708 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAGA TCGATCTGAC CGGGCAGGTG GCGGTGGTGA CGGGCGGCTC GTCCGGCATC
GGCCTCGCGA CTGCCGAACG GTTCCTGCAG GCCGGCGCGT CGGTCGCGAT TTGCGGCCGC
GACGGCGAAC GCCTCGCGCG CGCCGAAGCG ATGCTCGGCG AGAAATACGC GGGCGCGCAA
TTGCTCGCCG TGCGTTGCAA CGTGCTCGAC GAAGCCGACG TGGCCGCGTT CGCGCAGGCC
GTGTCCGAGC GCTTCGGCCG CGCCGACATG CTGGTCAACA ACGCGGGCCA GGGCCGCGTG
TCGACCTTCG CCGACACGAC CGACGACGCA TGGCGCGAAG AGCTCGAACT GAAGTACTTC
AGCATCATCC GCCCGACGCG CGCGTTTTTG CCGCTGCTGC GCGACGCGCA GGCGCCGACG
ATCACCTGCG TGAACTCGCT GCTCGCGCTG CAGCCGGAGC CGCACATGGT CGCGACGTCG
TCGGCGCGCG CGGGCGTGCT GAGCTTCGTG AAGTCGCTCG CAACCGAACT GGCGCCGCAG
CGCATCCGCG TGAACTCGAT CCTGATCGGC ATCGTCGAGT CGGGTCAGTG GCGCCGCCGC
TACGAAGCGC AGGCGCAGGC CGGCGAAAGC TGGGAAGACT GGACGGGCGC GCTTGCCCGC
AAGAAGAACA TTCCGCTGAA TCGCTTCGGC AAGCCCGACG AGGCAGCCTG GGCACTTTTT
TATCTCGCAA CGCATCTGTC GTCCTACACG ACGGGCAGCC ATATCGACGT TTCTGGAGGC
TTTGCACGCC ATGTCTAA
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| Protein sequence | MIEIDLTGQV AVVTGGSSGI GLATAERFLQ AGASVAICGR DGERLARAEA MLGEKYAGAQ
LLAVRCNVLD EADVAAFAQA VSERFGRADM LVNNAGQGRV STFADTTDDA WREELELKYF
SIIRPTRAFL PLLRDAQAPT ITCVNSLLAL QPEPHMVATS SARAGVLSFV KSLATELAPQ
RIRVNSILIG IVESGQWRRR YEAQAQAGES WEDWTGALAR KKNIPLNRFG KPDEAAWALF
YLATHLSSYT TGSHIDVSGG FARHV
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