| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_0047 |
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| Symbol | |
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| ID | 5054974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | + |
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| Start bp | 35752 |
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| End bp | 36534 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640467627 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001152316 |
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| Protein GI | 145590314 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATACTAA AGGGGAAGGT GGCCATAGTA ACTGCGGCGA GCCGCGGCAT AGGCGCAGGG
GTGGCCAACG TCCTCGCAAG AGAGGGGGCA GACCTCGTAG TAGCTGCAAG AGATGTGAAA
AGGCTAGAAG AAACGGCAAA AAGGCTCTCA GCCCAATACG GCGTATCGGT TGTCCCTGTC
CAAGCAGATC TAACAAGGAG GGAAGACGTA AAGCGCATCG CAGAGCAAGC CGTGCGTAAC
TTTGGCAAGA TCGACATACT TGCCTACAAC ACGGGCCCGC CGAAACCTGG CTCCTTTTTA
GAGCTCACAG AAGAGGACTG GGAATACGGC GTGAGGCTTT TACTGCTAAG CGCCGTCTGG
ATAACTAGGG ACGTCTTGCC CTACATGATA GAGAGGAGGT GGGGGCGGCT AATATACATC
ACGTCGAGCA CGCTCAAACA GCCTATTCCC ACGCTGACCT TGTCCAACGT GATCAGGATC
TCGTTGGCGG GGCTCGTAAA GACTTTGGCC TACCAGCTGG GGCGCTACAA CATCCTAGTC
AACGGCATTA TGCAAGGGTA CATAGACACG GACAGGGTGA GGGAGGTAGC CGCGGCCCGG
GCCGCCGCCG AGGGGAAGAC CGTCGAGGAG ATCATTGCAG AAATAGGCAA GGAGGTCCCA
CTCGGCAGAC TGGGTAAACC AGAAGAGATT GGCGAGTTGG TGGCATTCCT GGCGTCTGAG
AAGGCCAACT ATATCACTGG CTCTCTAATA TTAATCGACG GCGGTAGAAC GCTATGTATA
TAG
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| Protein sequence | MILKGKVAIV TAASRGIGAG VANVLAREGA DLVVAARDVK RLEETAKRLS AQYGVSVVPV
QADLTRREDV KRIAEQAVRN FGKIDILAYN TGPPKPGSFL ELTEEDWEYG VRLLLLSAVW
ITRDVLPYMI ERRWGRLIYI TSSTLKQPIP TLTLSNVIRI SLAGLVKTLA YQLGRYNILV
NGIMQGYIDT DRVREVAAAR AAAEGKTVEE IIAEIGKEVP LGRLGKPEEI GELVAFLASE
KANYITGSLI LIDGGRTLCI
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