| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_3370 |
|---|
| Symbol | |
|---|
| ID | 8014250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 3382286 |
|---|
| End bp | 3383074 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644825929 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002977156 |
|---|
| Protein GI | 241206060 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.363126 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.172275 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCG GATTGAAGGG AAAGATTGCC GTCATAACAG GTGCGTCGGT CGGCATCGGG
CTGGCAATCG CCGAGGGGCT GGCGGCTGAG GGCGCCGACC TCGTGCTGGC AGCGCGCGGC
GGTGAGCGGC TCGTGGCGGA AGCCGCCCGT ATCGCCGAGA CGTACGGCGT CAGCGCCACC
GCTGTCGCGG CCGATGTGGC GACGGTTGCG GGAACCGAGG CGATCATTAC GGCGGCGGCC
GAAAAAGGCG GCGCCGATAT CCTCATCAAC AATGCCGGCA CCGGCTCGAA CGAGACGGTG
ATGGAGGCGC CCGACCAGAA GTGGCAGGAC TATTGGGACT TGCATGTGAT GGCCGCCGTG
CGGCTGGCGC GCGGCATCGC GCCGCAGATG AAGCAACGCG GCGGCGGTGT GATCCTGCAC
AATGCCTCGA TCTGCGCCGT TCAGCCGCTC TGGTACGAGC CGATCTACAA TGTCAGCAAG
TCGGCGCTGA TGATGTTTTC GAAGACGCTC TCGACCGAGC TCATCAAGGA CAATATCCGC
GTCAACTGCG TCAATGCCGG TCTGATCCTG ACGCCCGACT GGATCAAGAC CGCCAAACAA
TTGACGGCCG AGACCGGCGG CAACTGGGAA GGCTACCTGC AGAGCGTCGC CAACGAGCAC
GCCGCCTCCA AACGCTTCGG CACACCGGAA GAGCTGGCAA ACGTCTTCGT CTTCCTGAGT
TCGGAGCGCG CGAGCTATTG CATCGGCTCG ACCTATTTCG TCGATGGCGG CATGCTGAAG
ACGATCTGA
|
|---|
| Protein sequence | MDLGLKGKIA VITGASVGIG LAIAEGLAAE GADLVLAARG GERLVAEAAR IAETYGVSAT
AVAADVATVA GTEAIITAAA EKGGADILIN NAGTGSNETV MEAPDQKWQD YWDLHVMAAV
RLARGIAPQM KQRGGGVILH NASICAVQPL WYEPIYNVSK SALMMFSKTL STELIKDNIR
VNCVNAGLIL TPDWIKTAKQ LTAETGGNWE GYLQSVANEH AASKRFGTPE ELANVFVFLS
SERASYCIGS TYFVDGGMLK TI
|
|---|
| |