| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_A1312 |
|---|
| Symbol | |
|---|
| ID | 4888151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009075 |
|---|
| Strand | + |
|---|
| Start bp | 1235806 |
|---|
| End bp | 1236603 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640131251 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001062309 |
|---|
| Protein GI | 126445022 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.445214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCAGA TCGACTTGAG CGGGCAAGTC GCCGTGGTGA CGGGCGGCTC GTCCGGCATC
GGCTACGCGA GCGCCGAGCT CTTCCTGCGC GCGGGCGCGT CGGTCGCGAT ATGCGGCCGC
GGCGATGAGC GGCTCGCGAG CGCGCACGCG CGGCTCGTGC GGCAGTTCCC GCGCGAGCGC
GTGCTTGCCG TGCGTTGCGA CGTGCTCGAC GAAGCCGACG TGACCGCGTT CGCGCAGGCC
GTTGCCGAGC GCTTCGGCGG CGCGGACATG CTCGTCAACA ACGCGGGCCA GGGCCGCGTG
TCGACGTTCG CGGACACGAC GGACGACGCG TGGCGCGACG AACTCGAACT GAAATACTTC
AGCATCATCC GCCCGACGCG CGCGTTCCTG CCGCTGCTGC GCGCGTCGAG TGCGCCGAGC
ATCACCTGCG TGAATTCGCT GCTCGCGCTG CAGCCCGAGC CGCACATGGT CGCGACTTCG
TCGGCGCGCG CCGGCGCGCT GAGCCTCGTC AAATCGCTCG CGACCGAGCT CGCGCCCGAG
CGCGTCCGCG TCAATTCGAT CCTGATCGGC ATCGTCGAAT CGGGTCAATG GCGGCGGCGC
TACGACGCGC AGGCCGCGCC GGGCGAATCG TGGGAAGCGT GGACAGCCGC GCTCGCCGCG
AAGAAAAACA TTCCGCTTGC GCGCTTCGGC CGGCCCGACG AGGCCGCGTG GGCGCTCTTT
TATCTCGCAA CGAATCTGTC GTCTTACACG ACGGGCAGCC ATATCGACGT ATCAGGAGGC
TTTGCACGCC ATGTCTAA
|
|---|
| Protein sequence | MIQIDLSGQV AVVTGGSSGI GYASAELFLR AGASVAICGR GDERLASAHA RLVRQFPRER
VLAVRCDVLD EADVTAFAQA VAERFGGADM LVNNAGQGRV STFADTTDDA WRDELELKYF
SIIRPTRAFL PLLRASSAPS ITCVNSLLAL QPEPHMVATS SARAGALSLV KSLATELAPE
RVRVNSILIG IVESGQWRRR YDAQAAPGES WEAWTAALAA KKNIPLARFG RPDEAAWALF
YLATNLSSYT TGSHIDVSGG FARHV
|
|---|
| |