| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4318 |
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| Symbol | |
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| ID | 8360491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5375891 |
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| End bp | 5376685 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644966479 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003123967 |
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| Protein GI | 256423314 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.319531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0832513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACA AAAAGCACGA AAGTCTGGAA TTAGATGGCA AAATTGCCTT GGTTACCGGT
GGTACGAAAG GCATCGGGAA GGCAATCGCA GACAGGTTGA CGGCCGCAGG AGCAAAAGTC
ATAGTCACTG CCCGCAATGC GCCCGCGGAA ATGAAAGCAG AACAGTACTT TATAGCGGCG
GATTTTTCAA CCTCTGAAGC TGTAAATACC TTAGGAGCAG AAGTTCTTGA AAAATTCGGA
ACTGTTGATA TACTGGTTAA TAATGCGGGC GGGAACGGTA ATCCTAGGGG TGGTTTTAGC
ATGCTGACGG ACGAACATTG GGAACATACT TTTCAACTTA ATGTAATGTC AGCAGTACGT
TTAGACCGCA TATTGCTTCC AGCTATGATC AAACAAAATA ATGGGGTGAT TATCCACGTG
TCTTCGGGAG TCGGACAAAT GCCGTTCTGG GAGTTTACTA TGCCTTATGC CGCATCTAAA
GCGGCACTTA ATAATTATAG CAAATCACTT TCCTCAGAGG TGGCTGGTAA AGGTGTTCGG
GTTCTTGCGA TATCTCCTGG TGTAGTTAAA ACTAGTGGTA TGGATGCATT TTTGCAAAAC
CTTGCAGAAA CTATGAAGAT ATCATCTGAA GAGGCCAATC AATTGTTAAT GAATACAATT
GGTGGAGTAC CTATTGGCAG ACTTGCCGCA CCTGAGGAAG TTGCTGAACT AGTTGGTTTT
TTGGTCTCTC CACGCGCATC ATACTTAACA GGTGCAAACT ATCTTGTTGA TGGAGGTGCA
ATTCCTTTGG CTTAA
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| Protein sequence | MENKKHESLE LDGKIALVTG GTKGIGKAIA DRLTAAGAKV IVTARNAPAE MKAEQYFIAA
DFSTSEAVNT LGAEVLEKFG TVDILVNNAG GNGNPRGGFS MLTDEHWEHT FQLNVMSAVR
LDRILLPAMI KQNNGVIIHV SSGVGQMPFW EFTMPYAASK AALNNYSKSL SSEVAGKGVR
VLAISPGVVK TSGMDAFLQN LAETMKISSE EANQLLMNTI GGVPIGRLAA PEEVAELVGF
LVSPRASYLT GANYLVDGGA IPLA
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