| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3337 |
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| Symbol | |
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| ID | 4312339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 128973 |
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| End bp | 129776 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638151179 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_775226 |
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| Protein GI | 115358088 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.964929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACAG GCCTTGAAGG GAGGATTGTG CTCATTACGG GCGCTGCGCA AGGCATCGGC
CGCGCGACCG CGCTGGGATT TGCGCGGGAA GGCGCGCGTC TTTGTCTTGT CGACATCGAC
GCTGACGCCC TGGAAGAAGC ACAGTCAGAG CTGCGCTCGC TTGGAACGAG CGTCACGATT
GCGAAAGCGG ACCTGTCCAC GATCGGCGGA GTGAAGGGCG GCATTGACAC GGTACTGAAG
TCGTATAACG GCGAGGTGGA CATTCTGGTC AACAACGTTG GTGCCGGGAA GGTCCGCGCG
TTCGAAGAAC TCTCGGACGA AGAGTGGGAC TTCACGCTGA GTCTCAATTT CATGAGCTAC
GTCCGGACGT GTCGGTATCT GCTGCCGGTG CTGCGTACTC GTGAAAAGCC GGTGATCATC
AACAACGCGT CGGACCTGGC GCGCCAGCCC GAACCTGTAC CCATCGACTA CTCCGCATCC
AAGGCAGCAG TCCTCGCGCT CACGAAAGGC CTCGCGCGCG CCGAAGCGCC AAAGATTCGT
GTGAACGCAG TGGCGCCTGG CCCGGTCTGG ACGCCGTTCT GGACGAAGCA GGGTGGATTT
GCAGACACGA TGGGCAGGTT TCATGGAATG GCGCCAAAGG AAGCCGTCGA GCACGAACTG
TCTCTGCGGC AGTTGCCGCT GAACCGATTG GGGCAGCCAG ACGAGGTGGC AAATGTGATT
GTCTTCCTCG CCTCCAACCT GGCGTCGTTC GTTACGTCGT CAGTGTGGGG CGTGGACGGA
GGCAGCATTC GGAGTCTCAT CTGA
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| Protein sequence | METGLEGRIV LITGAAQGIG RATALGFARE GARLCLVDID ADALEEAQSE LRSLGTSVTI
AKADLSTIGG VKGGIDTVLK SYNGEVDILV NNVGAGKVRA FEELSDEEWD FTLSLNFMSY
VRTCRYLLPV LRTREKPVII NNASDLARQP EPVPIDYSAS KAAVLALTKG LARAEAPKIR
VNAVAPGPVW TPFWTKQGGF ADTMGRFHGM APKEAVEHEL SLRQLPLNRL GQPDEVANVI
VFLASNLASF VTSSVWGVDG GSIRSLI
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