| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4560 |
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| Symbol | |
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| ID | 6309329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 4866403 |
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| End bp | 4867209 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642653240 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001927193 |
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| Protein GI | 188583748 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.62458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCG GCATCAGCGG CCGCGTCGCG GTGATCACCG GTGGCGATTC CGGCATGGGC
TTTGCCAGCG CGGAGTACCT CCTGCGCGAG GGCGTCAAGG TCGTGCTCTC CGATCTGAAG
GAGAAGGAAC TGGAAGAGGC GGCCGGGCGG CTCGCGGCCC TCGGTCCCGT GAAGGCGTGC
CAGGCGGACC TCGCCACCGA GGCGGGCGCG CGCAAGCTGC GCGACTTCGC CGACCAAGCC
TTCGGCGAGA CCCCCACCAT CCTCGTCAAC GCCGCTGGCG TCACCGGCGC CACCGGCGAT
TTCCTCGAGA TCGACGACGA GGGCTGGATG TCGACGATCC AGGCCGACCT GATGGCGGCG
GTGCGGGTGG CGCGCGCCTT CATCCCCGGC ATGCGGTCGC AGAAATGGGG GCGGATCGTG
CTCTTCACCT CCGAGGACGC GGTGCAGCCC TATGTCGAGG AACTGCCCTA CTGCGCCGCC
AAGGCCGGCC TGATGAACCT GGCCAAGGGC CTGTCCAAGG CCTACGGCCC GGACGGGGTG
CTGGTGAATT CGGTGGCGCC CGCCTTCGTG GCGACACCCA TGACCGATGC GATGATGGAG
AAGCGCGCCG CCGAACTCGG CGTCTCCTTC GACGAGGCGG TCGAGAGCTT CCTCGAAGAG
AAGCGTCCCG GCATCGTCGC CAAGCGCCGC GGCCGGGTCG AGGAGGTCGC CGCCGCGGTC
GCCTTCCTCT GCTCCGAGCA GGCGAGCTTC ATCACCGGCG AGAACCTGCG CGTCGACGGC
GGCGCCGTCC TCACCATGGC GGCGTGA
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| Protein sequence | MDLGISGRVA VITGGDSGMG FASAEYLLRE GVKVVLSDLK EKELEEAAGR LAALGPVKAC
QADLATEAGA RKLRDFADQA FGETPTILVN AAGVTGATGD FLEIDDEGWM STIQADLMAA
VRVARAFIPG MRSQKWGRIV LFTSEDAVQP YVEELPYCAA KAGLMNLAKG LSKAYGPDGV
LVNSVAPAFV ATPMTDAMME KRAAELGVSF DEAVESFLEE KRPGIVAKRR GRVEEVAAAV
AFLCSEQASF ITGENLRVDG GAVLTMAA
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