| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4079 |
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| Symbol | |
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| ID | 5831022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4536988 |
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| End bp | 4537794 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641369870 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001641520 |
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| Protein GI | 163853477 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.130432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCG GCATCAGCGG TCGCGTCGCG GTCATCACCG GCGGCGATTC CGGCATGGGC
TACGCGAGCG CGGAATATCT GCTGCGCGAA GGCGTCAAAG TCGTCCTCTC CGACCTGAAG
GAGAAGGAAC TGGAGGAGGC GGCCGCGCGG CTCGCGGCGC TCGGCCCGGT CAAGTTCTGC
CAGGCCGACC TCTCGTCGGA TGCGGGGGCA CGCAAGCTGC GCGACTTCGC CGAGCAGGCC
TTCGGCGAGA CACCCACCAT CCTCGTCAAC GCCGCCGGCG TCACCGGCGC CACCGGCGAC
TTCCTGGAGA TCGACGACGA GGGCTGGATG TCGACGATCC AGGCCGACCT GATGGCAGCG
GTGCGGATGG CGCGCGCCTT CATCCCCGGG ATGCGGACCC AGAAATGGGG GCGGATCGTG
TTCTTCACCT CCGAGGACGC GGTGCAACCC TATGTCGAGG AGCTGCCCTA CTGCGCCGCC
AAAGCCGGCC TGATGAACCT GACCAAGGGC CTCTCCAAGG CCTACGGGCC GGACGGGGTG
CTGGTGAACT CGGTGGCGCC CGCCTTCGTC GCCTCGCCCA TGACCGATGC GATGATGGAG
AAGCGCGCCG GGGAACTCGG CGTCTCCTTC GACGAGGCGA TCGAGAGCTT CCTCGAAGAG
AAGCGCCCCG GCATCGTCGT CAAGCGCCGC GGCCGGGTCG AGGAGGTCGC GTCGGCGGTG
GCCTTCCTGT GCTCGCAGCA GGCGAGCTTC ATCACCGGCG AGAACCTGCG CGTCGATGGC
GGTGCCGTCC TGACCATGGC GTCCTGA
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| Protein sequence | MDLGISGRVA VITGGDSGMG YASAEYLLRE GVKVVLSDLK EKELEEAAAR LAALGPVKFC
QADLSSDAGA RKLRDFAEQA FGETPTILVN AAGVTGATGD FLEIDDEGWM STIQADLMAA
VRMARAFIPG MRTQKWGRIV FFTSEDAVQP YVEELPYCAA KAGLMNLTKG LSKAYGPDGV
LVNSVAPAFV ASPMTDAMME KRAGELGVSF DEAIESFLEE KRPGIVVKRR GRVEEVASAV
AFLCSQQASF ITGENLRVDG GAVLTMAS
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