Gene Mnod_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1310 
Symbol 
ID7308062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1385367 
End bp1386164 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content72% 
IMG OID643599052 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002496613 
Protein GI220921312 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATTG ATCTCTCGGG GCGGCGCGCC CTCGTCACGG GCTCGACCGC GGGCATCGGC 
TACGCCATCG CCAAGGCGCT CGGCGATCTC GGGGCGACCG TGGCGGTGAA CGGGCGCACG
GCGGAGCGGG TGGAGGCGGC CGTCACGGCG CTCTCCCATG CGGCGCCGAA GGGACGCTTC
GTGCCTGCGC CCGGCGACGT CGCGACGGCC GAGGGGGCGG CCGCGCTCCG GGCCGCGCTG
CCGGAGGTGG ACATCCTCGT CAACAACACC GGGATCTTCG AGCCCAAGCC CTTCTTCGAG
ATCCCGGACG AGGATTGGCA GCGCTTCTTC GAGGTCAACG TGCTCAGCGG CGTGCGGCTG
TCGCGGGCCT ACGCGCCCGG CATGGTCGCC CGCGGCTGGG GCCGGGTGGT GTTCATCTCC
AGCGAATCCG CCCTGCAGAT CCCCGTGGAG ATGGTCCATT ACGGCATGAC CAAGACCGCG
CAGCTCGCGG TGGCGCGGGG CCTCGCCGAG ACCGTCGCGG GCACGGGTGT CACGGTGAAT
TCGGTGCTCC CGGGCCCGAC CCTCTCGGAG GGCGTGGCCG CCTTCATGCA GCAGATGGCG
GCGGGCGTCG CGGATCCGGA CCTCGACGCG ATGGGGCGCG CCTTCATCAA GGAACACAGG
CCGACGTCGC TCATCGGGCG GCTCGCCTCG CCCGAGGAGG TCGCGAACCT CGTCGCCTAT
CTGTGCACCC CGGCGGCCAG CGCCACGAGC GGCGCCGCGG TCCGGGTCGA TGGCGGGGTG
GTCAGGGCGA TCGTGTGA
 
Protein sequence
MDIDLSGRRA LVTGSTAGIG YAIAKALGDL GATVAVNGRT AERVEAAVTA LSHAAPKGRF 
VPAPGDVATA EGAAALRAAL PEVDILVNNT GIFEPKPFFE IPDEDWQRFF EVNVLSGVRL
SRAYAPGMVA RGWGRVVFIS SESALQIPVE MVHYGMTKTA QLAVARGLAE TVAGTGVTVN
SVLPGPTLSE GVAAFMQQMA AGVADPDLDA MGRAFIKEHR PTSLIGRLAS PEEVANLVAY
LCTPAASATS GAAVRVDGGV VRAIV