| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3998 |
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| Symbol | |
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| ID | 4453095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 887402 |
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| End bp | 888181 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639696056 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_837627 |
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| Protein GI | 116692094 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.219529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.855518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGA CGCTGGAATT GCAGGGCAAG CGCGTCCTGG TGACGGGCGG GACGATGGGT
GTCGGAAAGG CCGTCGTCGG CTTGTTCCGC GAACTCGGCG CGAAGGTACT CACCACCGCG
CGCACGCCAC CGGCCGATAC GCCCGCCGAC ATCTTCGTCG CGGCGGATCT GGCGACCCTC
GAGGGCTGTG AAGCAGTGGC CGAGGCCGTG ATGGCCAACT TTGGCGGCGT CGACGTGATC
GTCCACGTCG TGGGCGGTTC ACGATCGCCT GCCGGAGGTT TCGCTGCATT GAGCGAAGAT
GCTTGGCAGG ACGAACTGAA CCTGAATCTC CTGCCCGCGG TTCGACTGGA CCGCGCATTG
TTGCCGGGCA TGCTGGCACA ACGCGCAGGG GTCGTCATTC ACGTCACGTC GATCCAGCGC
GCGCTTCCGT TGCCGGAATC GACCACGGCC TATGCGGCAG CGAAAGCGGG GCTTTCCACC
TATAGCAAGA GCCTGTCGAA GGAAGTCTCG CCCAAGGGCA TTCGCGTGAT CCGTGTTGCG
CCCGGGTGGA TCGAAACCGA AGCGGCCGTC GCTTTCGCGG AACGGCTCGC CGAGCAGGCG
GGAACCGACT ATGAAGGCGG CAAGCAGATC ATCATGGATT CGCTCGGCGG CATTCCGTTG
GGACGGCCGT CGACGCCCGG CGAAGTGGCG AATCTGATCG CCTTCCTGGC GTCCCCGCGT
GCCGCGTCGA TTACCGGCGC CGAGTATGTG ATCGATGGCG GCACGATTCC GACTGCGTGA
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| Protein sequence | MAMTLELQGK RVLVTGGTMG VGKAVVGLFR ELGAKVLTTA RTPPADTPAD IFVAADLATL
EGCEAVAEAV MANFGGVDVI VHVVGGSRSP AGGFAALSED AWQDELNLNL LPAVRLDRAL
LPGMLAQRAG VVIHVTSIQR ALPLPESTTA YAAAKAGLST YSKSLSKEVS PKGIRVIRVA
PGWIETEAAV AFAERLAEQA GTDYEGGKQI IMDSLGGIPL GRPSTPGEVA NLIAFLASPR
AASITGAEYV IDGGTIPTA
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