Gene Mpop_5269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5269 
Symbol 
ID6313419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5635053 
End bp5635838 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID642653952 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_001927898 
Protein GI188584453 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGA AAGGGAAAGC CGCCGTCGTC ACCGGATCGA CCAGCGGCAT CGGCCTCGCC 
ATCGCCCGGG GCTTTGCCAA GGAGGGCGCG AACGTCGTCC TCAACGGCTT CGGCAAGCCC
GAGGAGATCG AGCGGACCCG CAGCGCCATC GAGAGCGAGT TCGGCGTCAA GGCGGCCTAC
TCGCCCGCCG ACCTCACCAA GTCCGACGCG ATCGGTGGCC TGATCGGGCT TTCGGTCGAG
ACGTTCGGCA GCGTCGACAT CCTCGTGAAC AATGCGGGCG TGCAGTACGT CGCGCCGATC
GAGGAGTTCC CGGTCGAGAA GTGGGACCAG ATCATCGCGC TGAACCTCTC CTCGGCCTTC
CACACCCTGC GCGCCGCCGT GCCGCACATG AAGGCGAAGG GCTGGGGCCG GGTCATCAAC
ACCGCCTCGG CGCACTCGAT GGTCGCCTCG CCCTACAAGT CGGCCTATGT TGCCGCCAAG
CACGGGATCG TCGGACTGAC CAAGACCGCG GCGCTGGAAC TCGCCACCCA CGGCATCACC
GTGAACTGCA TCTCGCCCGG CTATGTCTGG ACCCCCCTCG TCGAGAACCA GATCCCGGAC
ACGATGAAGG CGCGCGGGAT GACCAAGGAG CAGGTGATCG AGGACGTGCT GCTCAAGGCG
CAGCCGACCA AGGAATTCGT CACCGTCGAT CAGGTCGCCG CGCTCGCCGT GTTCCTGAGC
TCCGACAGCG CCAGCCAGAT CACCGGCGCC AACATCGCCA TGGATGGCGG CTGGACGGCG
CAGTAG
 
Protein sequence
MSLKGKAAVV TGSTSGIGLA IARGFAKEGA NVVLNGFGKP EEIERTRSAI ESEFGVKAAY 
SPADLTKSDA IGGLIGLSVE TFGSVDILVN NAGVQYVAPI EEFPVEKWDQ IIALNLSSAF
HTLRAAVPHM KAKGWGRVIN TASAHSMVAS PYKSAYVAAK HGIVGLTKTA ALELATHGIT
VNCISPGYVW TPLVENQIPD TMKARGMTKE QVIEDVLLKA QPTKEFVTVD QVAALAVFLS
SDSASQITGA NIAMDGGWTA Q