| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_46890 |
|---|
| Symbol | |
|---|
| ID | 4383057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4176124 |
|---|
| End bp | 4176918 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639326336 |
|---|
| Product | putative short-chain dehydrogenase |
|---|
| Protein accession | YP_791901 |
|---|
| Protein GI | 116049296 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0000947706 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCG ATCTGAGCGA CAAACTGGCA ATCGTCAGCG GTTCCACCGC CGGCATCGGC
TTCGCCATCG CCAGCGGCCT CGCCGCCGCC GGCGCCACCG TGGTGGTCAA CGGACGCAGC
CAGGCGGCGG TGGACCGTGC GATCGCGGCG ATCCGGAACG GCCAGCCGGA TGCCAAGGTA
CGCGGCGTCG CCGGCGACCT GGGCACGGCG GAAGGCTGCG CGGCTTTCGT CGCGGCCGAG
CCGAAGGCGG ACATCCTGGT CAACAACCTG GGCATCTTCG AGCTGAAGGA CTTCTTCGAC
ATCGAGGACG CCGAGTGGAG CCGCTTCTTC GAGGTCAACG TGATGTCCGG GGTGCGCCTG
GCCCGCGCCT ACGTCCCGGG AATGGTCGAG CGTGGTTGGG GGCGAGTGGT GTTCCTGTCT
TCGGAATCGG CGTTGAACAT CCCGGCGGAC ATGATCCACT ACGGCTTCAG CAAGACCGCC
AACCTCTCGG TGTCGCGCGG CCTGGCCAAG CGCCTGGCCG GCACCGGGGT GACGGTGAAT
GCGGTGCTGC CCGGACCGAC CCTCACCGAA GGCGTCGCCG AGATGCTTCG CGAGGATGCG
CAGAAGGCCG GGCAGAGCAT AGAAGAGGCC GGCACCGACT TTGTCCGGCA GCACCGTTCC
AGTTCGATCA TCCAGCGCCT GGCGACGCCC GAGGAAGTCG CCAACCTGGT GGTCTACACC
TGCTCGACCC AGGCCTCGGC GACCACCGGC GCGGCCCTGC GGGTCGACGG CGGGGTGCTC
GACAGCCTGG CCTGA
|
|---|
| Protein sequence | MQIDLSDKLA IVSGSTAGIG FAIASGLAAA GATVVVNGRS QAAVDRAIAA IRNGQPDAKV
RGVAGDLGTA EGCAAFVAAE PKADILVNNL GIFELKDFFD IEDAEWSRFF EVNVMSGVRL
ARAYVPGMVE RGWGRVVFLS SESALNIPAD MIHYGFSKTA NLSVSRGLAK RLAGTGVTVN
AVLPGPTLTE GVAEMLREDA QKAGQSIEEA GTDFVRQHRS SSIIQRLATP EEVANLVVYT
CSTQASATTG AALRVDGGVL DSLA
|
|---|
| |