| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3588 |
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| Symbol | |
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| ID | 5085740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | + |
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| Start bp | 477719 |
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| End bp | 478483 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640485146 |
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| Product | hypothetical protein |
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| Protein accession | YP_001169762 |
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| Protein GI | 146279604 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00208776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.410255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCG ACACGTTCCG CCTCGATGGC AAGGTCGCGC TCGTCACCGG CGGAAGCCGC
GGCATCGGGC TTGCGATCGC ACGGCTCTTC GCCGAGGCCG GTGCGCGCAT CATGCTGACC
GCCCGCACCG AAACCGAGGC CGTGCGCGCG CTCGTCGCCG CGGATCCCGA CCGCTTCGCC
TGGGTGGCGG GCGACGTGAC CGACCCGGCG GTGCCGGATG CGCTGGTGCA GGCCACGCTC
GACCGCTTCG GCCGGCTCGA TGTGCTGGTG AACAACGCGG GTGTTGCCGA CGGCGGCGAC
TTCCACGAGT TCGACGACAC GCGCCTCGCC CGGATCATGG AGACGAACCT CATTGCACCC
TTCCGCATCG CCCGCGCCGC GGTGCGGCCG ATGCTGGCGC AGGGCGCGGG CTCGATCGTG
AACATCGGCT CGATTTCGGG GTTCGTGGCG AACAAGCCGC AGCTGCAGGT GGCCTACAAC
GCCTCGAAGG CGGCGGTGCA CCAGATGACC ACGGTCATGG CCTACGAATA TGCGCACCGC
GGCATCCGCG TGAATGCGCT GGCCCCCGGC TATGTGGTCT CCGACATGAC CGCCAAGGGC
ATCGCCAACG AAGACATGAA CCGCGTCTGG ACCGAGAACA CCCCGATGGG CCGCTTCGGC
GAGCCCGAGG AGATGGCGAC CTGCGTGCTG TTCCTCGCCT CGGACGCGGC CTCCTACGTC
ACCGGCGCCA CCCTGGTGGC GGACGGCGGC TACATCACCC ACTGA
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| Protein sequence | MSLDTFRLDG KVALVTGGSR GIGLAIARLF AEAGARIMLT ARTETEAVRA LVAADPDRFA
WVAGDVTDPA VPDALVQATL DRFGRLDVLV NNAGVADGGD FHEFDDTRLA RIMETNLIAP
FRIARAAVRP MLAQGAGSIV NIGSISGFVA NKPQLQVAYN ASKAAVHQMT TVMAYEYAHR
GIRVNALAPG YVVSDMTAKG IANEDMNRVW TENTPMGRFG EPEEMATCVL FLASDAASYV
TGATLVADGG YITH
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