| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_2321 |
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| Symbol | |
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| ID | 3908952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 2669174 |
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| End bp | 2669968 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637884218 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_485937 |
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| Protein GI | 86749441 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0737567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.413876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATCA ATCTCTCCGG CAAGACCGCG CTGGTCACCG GCTCGACGGC GGGCATCGGC
CACGCCATCG CCAGGGGGCT CGCCGCGGCC GGCGCCGAGG TCGTGGTCAA CGGCCGCAGC
CAGGCCAAGG TCGACGCCGC GCAGGCCGCG ATCGACAAGG CGGTGCCGGG CGCCAAGCTG
TGCGGCGTCG CCGCCGATGT CTCCACCGCG GAGGGCTGCG CCGCGCTGCT GGTCGCGATT
CCGCGCGTCG ACATCCTGAT CAACAATGCC GGCATCTTCG AACCGAAGGG CTTCTTCGAC
ATTCCGGACG CCGACTGGCA GCGCTTCTTC GACGTCAATG TGATGAGCGG CGTGCGGCTG
TCGCGCGGCT ACATGCCGGG GATGCTCGAG CGTAATTGGG GCCGCATCGT CTTCATCGCC
TCGGAATCCG CGCTCATGAT TCCGAAGGAG ATGATCCACT ACGGCATGAC CAAGACCGCG
CAGCTCTCGG TGTCGCGCGG CCTCGCGGAG ATGACCCGCG GCACCGCGGT GACGGTCAAT
GCGGTGATGC CGGGACCGAC GATGAGCGAA GGCGTGCAGA CCTTCGTCGC CGATCTGGCC
AAGCAGAACG GCCAGTCGGA GGCCGAGGCG GCGGCCAATT TCGTCAAGCA GCATCGCCCC
GGCTCACTGA TCCAGCGCTT CGCTACCGTC GAGGAGATCG CCAACATGGT GGTCTATGTC
AGCTCCAAGG AAGCCTCCGC CACCAACGGC GCCGCGCTGC GCGCCGAAGG CGGGCTCTTG
CAGACGATCG CGTAG
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| Protein sequence | MHINLSGKTA LVTGSTAGIG HAIARGLAAA GAEVVVNGRS QAKVDAAQAA IDKAVPGAKL
CGVAADVSTA EGCAALLVAI PRVDILINNA GIFEPKGFFD IPDADWQRFF DVNVMSGVRL
SRGYMPGMLE RNWGRIVFIA SESALMIPKE MIHYGMTKTA QLSVSRGLAE MTRGTAVTVN
AVMPGPTMSE GVQTFVADLA KQNGQSEAEA AANFVKQHRP GSLIQRFATV EEIANMVVYV
SSKEASATNG AALRAEGGLL QTIA
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