| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3582 |
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| Symbol | |
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| ID | 6180645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 518393 |
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| End bp | 519193 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641683351 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001810265 |
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| Protein GI | 172062614 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.30636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGA ATCTGAGGGG AAAGCGCGTG CTGGTGACGG GATCGACGGC CGGACTAGGT
GAGGCGATTG CCAAGTTGCT GGCTGCGGAG GGTGCGACAG TGGTTGTGCA TGGCCGCAGC
AGTGATCGTG CAGAGGCGGT CGCGGCAGCG ATCACAGTGG CAGGCGGCCA TGCCGAAGTC
GCGCTGGGCG ATCTGGCAAC CGATGCAGGC GCCAATGCCG TGGTTGCCAA GGCGACCGAA
GGTGGAACCA TCGACATACT GGTCAATAAC GCTGGCTATT ATCACCATTT GAACTGGCGC
ACTGCCTTAC CCGACAAGTG GATGGAGACC TATGAGGTCA ACGTCCTGTC CGCCGTGCGC
ATGATCCAGC GGCTGGTGCC AGCCATGCGC GAGCGCGGGT GGGGCCGCGT GATTCAGATC
GGCGGCGGAC TCGCCGGTCA GCCGGTCTCG ATGCAGCCTG ACTACAACGC CTCGCTTGCC
GCTAGGCACA ACCTAGCTGT TTCGCTGGCG CGCGACCTCA AGGACTCCGG CGTGACCTCG
AATGTTGTGG CACCCGGCGT GATTCTCGTG CCGGCCGTCA GGGAACTGCT CGAGAACATC
GCTCCGCAGC ACGGATGGGG TCGGACGTGG GAGGAGATTG AGCGCGGCTG CGTTCGCGAC
ATGGTGCCCA ACGACGTCGG CCGCCTTGGC CGTCCTGAAG AGATCGCGGC GGCGGTTGCT
TATCTCGCAA GCCCATATGC CGACTACGTG AGCGGCGCCA CGATCCGCGT CGATGGTGGC
ACGATCCGCT CTGCGTTCTG A
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| Protein sequence | MDLNLRGKRV LVTGSTAGLG EAIAKLLAAE GATVVVHGRS SDRAEAVAAA ITVAGGHAEV
ALGDLATDAG ANAVVAKATE GGTIDILVNN AGYYHHLNWR TALPDKWMET YEVNVLSAVR
MIQRLVPAMR ERGWGRVIQI GGGLAGQPVS MQPDYNASLA ARHNLAVSLA RDLKDSGVTS
NVVAPGVILV PAVRELLENI APQHGWGRTW EEIERGCVRD MVPNDVGRLG RPEEIAAAVA
YLASPYADYV SGATIRVDGG TIRSAF
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