Gene Mchl_3449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3449 
Symbol 
ID7114206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3636356 
End bp3637147 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID643526184 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002422197 
Protein GI218531381 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.637652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.978544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCG ACCTGAAGGG GCGCAGTGCC CTCGTCACCG GTTCCACCGG CGGCATCGGC 
TACGCGGTGG CCCGCGAACT CGCCCGGCTC GGCGCCTACG TCGCCGTCAA CGGCCGCACC
GGTGAGCGGG TGGAGGCGGC CATCGCGCGC CTGCGCGGCG AGGTGCCGGG GGCCGAGTTC
ATCGCCGGCA TCGGCGATGT CGGCACCGAG GAGGGGGCGG GCGAGCTCCT CGCCGCCCTG
CCGCGGGTCG ACATCCTGAT CAACAATGCC GGCATCTTCG AGCCGAAGCC ATTCTTCGAG
ATCGCGGATG CCGAGTGGCG CCGCTTCTTC GAGATGAACG TGATGAGCGG CATCCGCCTC
TCCCGCGCCT ACGGTCCCGG CATGGTCGAG CGCGGCTGGG GACGGATCGT CTTCATCGCC
AGCGAGTCGG GCGTCAACAT CCCGCCGGAG ATGGTCCATT ACGGCGTGAC GAAAACGGCG
CAGCTCGCCG TCTCCCGCGG TCTCGCCGAG ACGGTGGGCG GCAGCGGCGT CACCGTCAAC
AGCGTGCTCC CCGGTCCGAC CATGACCGAG GGCGTCGCGG ATTTTCTCGA ATCGATGGGC
GGGGGCGAAG GCGATCTGGA GGCCAAGGGC CGCGCCTTCA TCGCCGAGAA CCGGCCGACC
TCGCTCCTGA AGCGCCTCGC GCAGCCGGAG GAAGTGGCCA ACATGGTCGC CTATCTCTGC
ACGCCCGCCG CGAGCGCCAC CACGGGGGCG GCCCTGCGGG TCGATGGCGG CGTGCTGCGC
GGCATCATCT GA
 
Protein sequence
MDIDLKGRSA LVTGSTGGIG YAVARELARL GAYVAVNGRT GERVEAAIAR LRGEVPGAEF 
IAGIGDVGTE EGAGELLAAL PRVDILINNA GIFEPKPFFE IADAEWRRFF EMNVMSGIRL
SRAYGPGMVE RGWGRIVFIA SESGVNIPPE MVHYGVTKTA QLAVSRGLAE TVGGSGVTVN
SVLPGPTMTE GVADFLESMG GGEGDLEAKG RAFIAENRPT SLLKRLAQPE EVANMVAYLC
TPAASATTGA ALRVDGGVLR GII