More than 300 homologs were found in PanDaTox collection
for query gene Amir_3573 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_3573  transcriptional regulator, LuxR family  100 
 
 		 189 aa  363  1e-100  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_0351  LuxR family transcriptional regulator  49.45 
 
 		 195 aa  148  4e-35  Salinispora arenicola CNS-205  Bacteria  normal  0.147651  normal  0.0771656 
 
 
-
 
NC_009565  TBFG_10197  LuxR family two component transcriptional regulator  33.33 
 
 		 232 aa  80.1  0.00000000000002  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_2255  transcriptional regulator, LuxR family  34.29 
 
 		 207 aa  78.6  0.00000000000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0543436  hitchhiker  0.000519578 
 
 
-
 
NC_009077  Mjls_0940  response regulator receiver protein  35.86 
 
 		 207 aa  74.7  0.0000000000007  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_1891  transcriptional regulator, LuxR family  34.39 
 
 		 230 aa  74.3  0.000000000001  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00164243  normal  0.142555 
 
 
-
 
NC_009953  Sare_4852  LuxR family transcriptional regulator  41.73 
 
 		 207 aa  72  0.000000000004  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0262091 
 
 
-
 
NC_013093  Amir_2952  transcriptional regulator, LuxR family  37.59 
 
 		 207 aa  71.6  0.000000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0281323  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  33.52 
 
 		 215 aa  70.1  0.00000000002  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_2930  transcriptional regulator, LuxR family  40.19 
 
 		 208 aa  70.1  0.00000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.757677  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  35.75 
 
 		 221 aa  70.1  0.00000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  35.71 
 
 		 218 aa  69.7  0.00000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  33.52 
 
 		 215 aa  68.6  0.00000000005  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  33.52 
 
 		 215 aa  68.6  0.00000000005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  33.52 
 
 		 215 aa  68.6  0.00000000005  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  33.52 
 
 		 215 aa  68.6  0.00000000005  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  33.52 
 
 		 215 aa  68.6  0.00000000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_0350  LuxR family transcriptional regulator  34.81 
 
 		 202 aa  68.2  0.00000000007  Salinispora arenicola CNS-205  Bacteria  normal  0.204823  normal  0.0810275 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  32.42 
 
 		 215 aa  68.2  0.00000000007  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_5376  transcriptional regulator, LuxR family  35.42 
 
 		 213 aa  68.2  0.00000000007  Actinosynnema mirum DSM 43827  Bacteria  normal  0.416669  n/a   
 
 
-
 
NC_013131  Caci_4395  transcriptional regulator, LuxR family  30.5 
 
 		 208 aa  68.2  0.00000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  32.97 
 
 		 215 aa  68.2  0.00000000008  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  33.33 
 
 		 215 aa  67.8  0.00000000009  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  33.52 
 
 		 215 aa  67.4  0.0000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  33.54 
 
 		 214 aa  67.8  0.0000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal  1 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  33.53 
 
 		 219 aa  66.2  0.0000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal  1 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  36 
 
 		 219 aa  65.9  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_008009  Acid345_3748  two component LuxR family transcriptional regulator  29.44 
 
 		 211 aa  65.9  0.0000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.107866  normal  1 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  36 
 
 		 220 aa  65.9  0.0000000004  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal  1 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  36 
 
 		 219 aa  65.5  0.0000000005  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  33.33 
 
 		 231 aa  65.1  0.0000000006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  31.95 
 
 		 211 aa  64.7  0.0000000007  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  29.94 
 
 		 241 aa  64.7  0.0000000008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  35.2 
 
 		 234 aa  63.9  0.000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  32.24 
 
 		 224 aa  63.2  0.000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2446  transcriptional regulator, LuxR family  36.99 
 
 		 188 aa  63.2  0.000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_3574  transcriptional regulator, LuxR family  44.79 
 
 		 206 aa  63.2  0.000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  34.48 
 
 		 225 aa  63.2  0.000000002  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  32.58 
 
 		 223 aa  62.8  0.000000003  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal  1 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  36.92 
 
 		 207 aa  62  0.000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  33.82 
 
 		 234 aa  61.6  0.000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.683883 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  33.93 
 
 		 225 aa  62  0.000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.114252 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  38.41 
 
 		 217 aa  61.2  0.000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.48 
 
 		 236 aa  60.5  0.00000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  28.41 
 
 		 211 aa  60.8  0.00000001  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  31.36 
 
 		 219 aa  60.5  0.00000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal  1 
 
 
-
 
NC_008726  Mvan_5522  two component LuxR family transcriptional regulator  36.31 
 
 		 219 aa  60.8  0.00000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  37.96 
 
 		 206 aa  60.8  0.00000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal  1 
 
 
-
 
NC_013093  Amir_2811  two component transcriptional regulator, LuxR family  37.01 
 
 		 217 aa  60.5  0.00000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.206772  n/a   
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  33.54 
 
 		 204 aa  60.1  0.00000002  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35 
 
 		 229 aa  60.1  0.00000002  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_009921  Franean1_3808  LuxR family transcriptional regulator  35.47 
 
 		 268 aa  60.1  0.00000002  Frankia sp. EAN1pec  Bacteria  normal  0.0706178  normal  0.229787 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  33.09 
 
 		 228 aa  58.9  0.00000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_007348  Reut_B3606  LuxR transcriptional regulator  35.88 
 
 		 947 aa  58.9  0.00000004  Ralstonia eutropha JMP134  Bacteria  normal  0.156001  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.5 
 
 		 230 aa  58.9  0.00000004  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013093  Amir_1549  two component transcriptional regulator, LuxR family  38.41 
 
 		 238 aa  59.3  0.00000004  Actinosynnema mirum DSM 43827  Bacteria  normal  0.196807  n/a   
 
 
-
 
NC_008578  Acel_0973  two component LuxR family transcriptional regulator  54.1 
 
 		 216 aa  58.9  0.00000004  Acidothermus cellulolyticus 11B  Bacteria  normal  0.255067  normal  0.404517 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  30.85 
 
 		 232 aa  58.9  0.00000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  35.46 
 
 		 224 aa  58.5  0.00000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013757  Gobs_3437  two component transcriptional regulator, LuxR family  33.57 
 
 		 248 aa  58.2  0.00000007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.39912  n/a   
 
 
-
 
NC_013739  Cwoe_2525  two component transcriptional regulator, LuxR family  34.68 
 
 		 215 aa  57.8  0.00000008  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  31.78 
 
 		 228 aa  57.8  0.00000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal  1 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  32.16 
 
 		 242 aa  57.4  0.0000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  28.73 
 
 		 225 aa  57.4  0.0000001  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_008010  Dgeo_2486  two component LuxR family transcriptional regulator  34.62 
 
 		 208 aa  57.4  0.0000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  33.33 
 
 		 227 aa  57.4  0.0000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  30.21 
 
 		 250 aa  57.8  0.0000001  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  32.58 
 
 		 225 aa  57  0.0000001  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009784  VIBHAR_05153  hypothetical protein  24.62 
 
 		 218 aa  57  0.0000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  36.14 
 
 		 218 aa  57  0.0000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  34.04 
 
 		 226 aa  57  0.0000002  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_011831  Cagg_3359  two component transcriptional regulator, LuxR family  35.56 
 
 		 219 aa  57  0.0000002  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00321115  hitchhiker  0.000132937 
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  37.28 
 
 		 249 aa  57  0.0000002  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_011071  Smal_2061  two component transcriptional regulator, LuxR family  32.64 
 
 		 224 aa  56.6  0.0000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.737796  normal  1 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  31.21 
 
 		 253 aa  56.2  0.0000002  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  31.36 
 
 		 213 aa  56.6  0.0000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  30.23 
 
 		 230 aa  57  0.0000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_011145  AnaeK_0902  two component transcriptional regulator, LuxR family  50.82 
 
 		 208 aa  55.8  0.0000003  Anaeromyxobacter sp. K  Bacteria  normal  0.154451  n/a   
 
 
-
 
NC_007413  Ava_3072  two component LuxR family transcriptional regulator  43.75 
 
 		 209 aa  55.8  0.0000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.875677  normal  1 
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  33.77 
 
 		 209 aa  55.8  0.0000003  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_1132  DNA-binding response regulator, LuxR family  38.96 
 
 		 225 aa  56.2  0.0000003  Dehalococcoides sp. VS  Bacteria  normal  0.893152  n/a   
 
 
-
 
NC_014151  Cfla_2886  transcriptional regulator, LuxR family  33.13 
 
 		 252 aa  56.2  0.0000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.197544  normal  0.152863 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  27.81 
 
 		 218 aa  56.2  0.0000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_0541  two component transcriptional regulator, LuxR family  30 
 
 		 221 aa  55.8  0.0000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal  1 
 
 
-
 
NC_014158  Tpau_1989  two component transcriptional regulator, LuxR family  51.67 
 
 		 229 aa  56.2  0.0000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  30.11 
 
 		 224 aa  56.2  0.0000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_002936  DET1350  LuxR family DNA-binding response regulator  40.26 
 
 		 225 aa  55.8  0.0000004  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.00111586  n/a   
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  31.82 
 
 		 209 aa  55.8  0.0000004  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal  1 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  34.88 
 
 		 230 aa  55.8  0.0000004  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.62 
 
 		 239 aa  55.5  0.0000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  34.38 
 
 		 213 aa  55.5  0.0000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  31.85 
 
 		 221 aa  55.5  0.0000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_008009  Acid345_4067  two component LuxR family transcriptional regulator  32.1 
 
 		 233 aa  55.5  0.0000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.836498  normal  0.141664 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  34.24 
 
 		 216 aa  55.5  0.0000005  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  32.61 
 
 		 218 aa  55.5  0.0000005  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  34.03 
 
 		 226 aa  55.5  0.0000005  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  29.24 
 
 		 236 aa  55.5  0.0000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  29.85 
 
 		 210 aa  55.5  0.0000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009675  Anae109_0915  two component LuxR family transcriptional regulator  47.62 
 
 		 202 aa  55.5  0.0000005  Anaeromyxobacter sp. Fw109-5  Bacteria  hitchhiker  0.000299753  normal  1 
 
 
-
 
NC_007912  Sde_0994  response regulator receiver domain-containing protein  33.67 
 
 		 221 aa  55.1  0.0000006  Saccharophagus degradans 2-40  Bacteria  normal  0.16925  normal  1 
 
 
-
 
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