More than 300 homologs were found in PanDaTox collection
for query gene Suden_0625 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007575  Suden_0625  two component transcriptional regulator  100 
 
 		 217 aa  437  9.999999999999999e-123  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  1  n/a   
 
 
-
 
NC_013512  Sdel_0120  response regulator receiver  41.28 
 
 		 221 aa  163  2.0000000000000002e-39  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_09498  two-component system, transcriptional regulatory protein  36 
 
 		 236 aa  138  6e-32  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_007575  Suden_1365  two component transcriptional regulator  41.1 
 
 		 219 aa  137  2e-31  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.00130586  n/a   
 
 
-
 
NC_009441  Fjoh_4970  two component transcriptional regulator  35.29 
 
 		 228 aa  135  6.0000000000000005e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  0.375881  n/a   
 
 
-
 
NC_009441  Fjoh_3460  two component transcriptional regulator  36.73 
 
 		 238 aa  135  7.000000000000001e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0108229  n/a   
 
 
-
 
NC_013512  Sdel_0097  response regulator receiver  35.62 
 
 		 222 aa  133  1.9999999999999998e-30  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_4089  two component transcriptional regulator, winged helix family  32 
 
 		 230 aa  131  6.999999999999999e-30  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  hitchhiker  0.00519658 
 
 
-
 
NC_009802  CCC13826_1324  extracellular solute-binding protein  36.65 
 
 		 220 aa  130  2.0000000000000002e-29  Campylobacter concisus 13826  Bacteria  normal  0.273971  n/a   
 
 
-
 
NC_009715  CCV52592_1280  DNA-binding response regulator  34.55 
 
 		 220 aa  129  3e-29  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.0000547046  n/a   
 
 
-
 
NC_012039  Cla_0128  two-component response regulator  40.45 
 
 		 228 aa  128  6e-29  Campylobacter lari RM2100  Bacteria  normal  0.4797  n/a   
 
 
-
 
NC_007760  Adeh_2914  two component transcriptional regulator  33.48 
 
 		 245 aa  127  1.0000000000000001e-28  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.634998  n/a   
 
 
-
 
NC_011145  AnaeK_3000  two component transcriptional regulator, winged helix family  33.04 
 
 		 234 aa  127  2.0000000000000002e-28  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_3106  two component transcriptional regulator, winged helix family  33.04 
 
 		 234 aa  126  2.0000000000000002e-28  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_3997  two component transcriptional regulator, winged helix family  33.48 
 
 		 227 aa  126  2.0000000000000002e-28  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_3566  two component transcriptional regulator, winged helix family  32.29 
 
 		 228 aa  125  6e-28  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.720677 
 
 
-
 
NC_007760  Adeh_3856  two component transcriptional regulator  32.58 
 
 		 227 aa  124  8.000000000000001e-28  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.199978  n/a   
 
 
-
 
NC_014165  Tbis_0707  winged helix family two component transcriptional regulator  31.22 
 
 		 222 aa  124  1e-27  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003912  CJE1358  DNA-binding response regulator  40.7 
 
 		 221 aa  123  2e-27  Campylobacter jejuni RM1221  Bacteria  normal  0.0519481  n/a   
 
 
-
 
NC_014230  CA2559_03275  two-component system, transcriptional regulatory protein  33.48 
 
 		 234 aa  124  2e-27  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_5142  two component transcriptional regulator, winged helix family  31.82 
 
 		 224 aa  123  2e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.555028  normal  1 
 
 
-
 
NC_011145  AnaeK_3919  two component transcriptional regulator, winged helix family  33.03 
 
 		 227 aa  123  2e-27  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_008787  CJJ81176_1236  DNA-binding response regulator  40.7 
 
 		 221 aa  123  2e-27  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  hitchhiker  0.000000188808  n/a   
 
 
-
 
NC_013162  Coch_0209  two component transcriptional regulator, winged helix family  32.44 
 
 		 251 aa  123  3e-27  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_0856  two component transcriptional regulator, winged helix family  33.33 
 
 		 233 aa  123  3e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_0286  two component transcriptional regulator  31.8 
 
 		 227 aa  123  3e-27  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1333  response regulator receiver protein  30.77 
 
 		 222 aa  122  3e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.40527  normal  0.1595 
 
 
-
 
NC_002950  PG1089  DNA-binding response regulator RprY  32.59 
 
 		 245 aa  122  4e-27  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.414682 
 
 
-
 
NC_013132  Cpin_0693  two component transcriptional regulator, winged helix family  31.58 
 
 		 229 aa  122  4e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  34.09 
 
 		 237 aa  122  5e-27  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_3651  two component transcriptional regulator, winged helix family  30.53 
 
 		 228 aa  122  5e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.0435949 
 
 
-
 
NC_007908  Rfer_3820  two component transcriptional regulator  35.35 
 
 		 221 aa  121  7e-27  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_012857  Rpic12D_3610  two component transcriptional regulator, winged helix family  33.49 
 
 		 221 aa  120  9.999999999999999e-27  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010730  SYO3AOP1_0871  two component transcriptional regulator, winged helix family  34.74 
 
 		 214 aa  120  9.999999999999999e-27  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.0000000143126  n/a   
 
 
-
 
NC_010678  Rpic_4687  two component transcriptional regulator, winged helix family  33.49 
 
 		 221 aa  120  9.999999999999999e-27  Ralstonia pickettii 12J  Bacteria  normal  1  normal  0.195761 
 
 
-
 
NC_009707  JJD26997_0504  DNA-binding response regulator  40.7 
 
 		 221 aa  119  1.9999999999999998e-26  Campylobacter jejuni subsp. doylei 269.97  Bacteria  hitchhiker  0.000376141  n/a   
 
 
-
 
NC_011729  PCC7424_1723  multi-component transcriptional regulator, winged helix family  33.18 
 
 		 597 aa  120  1.9999999999999998e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000000000776738 
 
 
-
 
NC_011830  Dhaf_1740  two component transcriptional regulator, winged helix family  30.77 
 
 		 225 aa  119  1.9999999999999998e-26  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000204942  n/a   
 
 
-
 
NC_013456  VEA_003617  DNA-binding response regulator  30.23 
 
 		 218 aa  120  1.9999999999999998e-26  Vibrio sp. Ex25  Bacteria  normal  0.831618  n/a   
 
 
-
 
NC_008148  Rxyl_3017  two component transcriptional regulator  31.65 
 
 		 225 aa  119  3e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009715  CCV52592_1806  two-component response regulator  33.64 
 
 		 220 aa  119  3.9999999999999996e-26  Campylobacter curvus 525.92  Bacteria  normal  1  n/a   
 
 
-
 
NC_007575  Suden_0884  two component transcriptional regulator  31.65 
 
 		 218 aa  119  3.9999999999999996e-26  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.68851  n/a   
 
 
-
 
NC_013037  Dfer_5352  two component transcriptional regulator, winged helix family  31.39 
 
 		 224 aa  118  4.9999999999999996e-26  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009718  Fnod_0785  two component transcriptional regulator  37.16 
 
 		 229 aa  118  6e-26  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0635827  n/a   
 
 
-
 
NC_008607  Ppro_3752  two component transcriptional regulator  33.18 
 
 		 224 aa  118  6e-26  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000783534  n/a   
 
 
-
 
NC_004116  SAG0123  DNA-binding response regulator  31.51 
 
 		 223 aa  118  7e-26  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4122  two component transcriptional regulator, winged helix family  29.41 
 
 		 223 aa  118  7e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_03339  Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain  31.22 
 
 		 226 aa  117  9.999999999999999e-26  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_012039  Cla_1103  two-component response regulator  37.44 
 
 		 221 aa  117  9.999999999999999e-26  Campylobacter lari RM2100  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2549  response regulator receiver  31.36 
 
 		 222 aa  117  9.999999999999999e-26  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1242  two component transcriptional regulator, winged helix family  34.07 
 
 		 234 aa  117  9.999999999999999e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_3846  two component transcriptional regulator, winged helix family  31.36 
 
 		 222 aa  117  9.999999999999999e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_3888  two component transcriptional regulator  30 
 
 		 223 aa  117  9.999999999999999e-26  Caulobacter sp. K31  Bacteria  normal  0.130623  normal  0.799765 
 
 
-
 
NC_009767  Rcas_0997  two component transcriptional regulator  30.67 
 
 		 230 aa  117  9.999999999999999e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.679101  normal  1 
 
 
-
 
NC_009092  Shew_3317  two component transcriptional regulator  34.98 
 
 		 227 aa  117  1.9999999999999998e-25  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007404  Tbd_0136  two component transcriptional regulator  30.05 
 
 		 220 aa  116  1.9999999999999998e-25  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.235991  normal  1 
 
 
-
 
NC_007517  Gmet_3383  two component transcriptional regulator  32.27 
 
 		 224 aa  116  1.9999999999999998e-25  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007575  Suden_0258  two component transcriptional regulator  36.92 
 
 		 217 aa  117  1.9999999999999998e-25  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0200742  n/a   
 
 
-
 
NC_009486  Tpet_0521  two component transcriptional regulator  33.79 
 
 		 223 aa  116  1.9999999999999998e-25  Thermotoga petrophila RKU-1  Bacteria  normal  0.720367  n/a   
 
 
-
 
NC_008787  CJJ81176_0899  DNA-binding response regulator  32.72 
 
 		 220 aa  117  1.9999999999999998e-25  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.932074  n/a   
 
 
-
 
NC_008836  BMA10229_A2405  DNA-binding response regulator  34.4 
 
 		 250 aa  116  3e-25  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0552978  n/a   
 
 
-
 
NC_006348  BMA0271  DNA-binding response regulator  34.4 
 
 		 247 aa  116  3e-25  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  34.68 
 
 		 224 aa  116  3e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009080  BMA10247_0018  DNA-binding response regulator  34.4 
 
 		 247 aa  116  3e-25  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2671  DNA-binding response regulator  34.4 
 
 		 247 aa  116  3e-25  Burkholderia mallei SAVP1  Bacteria  normal  0.84234  n/a   
 
 
-
 
NC_003912  CJE0969  DNA-binding response regulator  32.26 
 
 		 220 aa  115  3.9999999999999997e-25  Campylobacter jejuni RM1221  Bacteria  normal  1  n/a   
 
 
-
 
NC_009707  JJD26997_0923  DNA-binding response regulator  32.87 
 
 		 220 aa  115  3.9999999999999997e-25  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_2809  two component transcriptional regulator  30.94 
 
 		 225 aa  115  3.9999999999999997e-25  Shewanella pealeana ATCC 700345  Bacteria  normal  0.302841  n/a   
 
 
-
 
NC_013132  Cpin_7053  two component transcriptional regulator, winged helix family  32.3 
 
 		 248 aa  115  3.9999999999999997e-25  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00262574  normal  1 
 
 
-
 
NC_002939  GSU0451  DNA-binding response regulator  31.36 
 
 		 224 aa  115  5e-25  Geobacter sulfurreducens PCA  Bacteria  normal  0.313098  n/a   
 
 
-
 
NC_008686  Pden_0310  two component transcriptional regulator  33.64 
 
 		 223 aa  115  5e-25  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.859655 
 
 
-
 
NC_009632  SaurJH1_1505  response regulator receiver  32.72 
 
 		 219 aa  115  6e-25  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.404603  n/a   
 
 
-
 
NC_009487  SaurJH9_1476  two component transcriptional regulator  32.72 
 
 		 219 aa  115  6e-25  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1649  two component transcriptional regulator, winged helix family  31.86 
 
 		 236 aa  115  6.9999999999999995e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011126  HY04AAS1_1268  two component transcriptional regulator, winged helix family  35.62 
 
 		 229 aa  114  7.999999999999999e-25  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_2384  two component transcriptional regulator, winged helix family  31.78 
 
 		 219 aa  114  7.999999999999999e-25  Variovorax paradoxus S110  Bacteria  normal  0.23421  n/a   
 
 
-
 
NC_011830  Dhaf_3593  two component transcriptional regulator, winged helix family  32.14 
 
 		 226 aa  114  1.0000000000000001e-24  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000142937  n/a   
 
 
-
 
NC_011894  Mnod_6194  two component transcriptional regulator, winged helix family  31.46 
 
 		 222 aa  114  1.0000000000000001e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_4521  two component transcriptional regulator  32.58 
 
 		 230 aa  114  1.0000000000000001e-24  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_1861  two component transcriptional regulator  33.03 
 
 		 225 aa  114  1.0000000000000001e-24  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000248634  n/a   
 
 
-
 
NC_008599  CFF8240_0840  transcriptional activator protein CopR  34.23 
 
 		 222 aa  114  1.0000000000000001e-24  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.048163  n/a   
 
 
-
 
NC_013132  Cpin_1246  two component transcriptional regulator, winged helix family  37.05 
 
 		 233 aa  114  1.0000000000000001e-24  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.877806  normal  1 
 
 
-
 
NC_009076  BURPS1106A_0813  DNA-binding response regulator  33.94 
 
 		 247 aa  113  2.0000000000000002e-24  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0618873  n/a   
 
 
-
 
NC_002977  MCA3105  DNA-binding response regulator PhoB  29.78 
 
 		 232 aa  113  2.0000000000000002e-24  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_2130  response regulator receiver  30.36 
 
 		 252 aa  113  2.0000000000000002e-24  Salinispora tropica CNB-440  Bacteria  normal  0.539517  hitchhiker  0.00279069 
 
 
-
 
NC_013161  Cyan8802_4261  two component transcriptional regulator, winged helix family  31.22 
 
 		 224 aa  113  2.0000000000000002e-24  Cyanothece sp. PCC 8802  Bacteria  normal  0.906422  normal  0.0109867 
 
 
-
 
NC_013517  Sterm_0528  two component transcriptional regulator, winged helix family  35.29 
 
 		 230 aa  113  2.0000000000000002e-24  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_2328  two component transcriptional regulator  31.63 
 
 		 227 aa  113  2.0000000000000002e-24  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  0.117296 
 
 
-
 
NC_009074  BURPS668_0809  DNA-binding response regulator  32.72 
 
 		 247 aa  113  2.0000000000000002e-24  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_0944  two component transcriptional regulator  30.45 
 
 		 225 aa  113  2.0000000000000002e-24  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.091613  normal  1 
 
 
-
 
NC_009012  Cthe_3069  two component transcriptional regulator  32.47 
 
 		 230 aa  113  2.0000000000000002e-24  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.0000000467461  n/a   
 
 
-
 
NC_010571  Oter_1727  two component transcriptional regulator  30.09 
 
 		 228 aa  114  2.0000000000000002e-24  Opitutus terrae PB90-1  Bacteria  normal  0.284746  normal  1 
 
 
-
 
NC_013510  Tcur_0578  two component transcriptional regulator, winged helix family  30.8 
 
 		 244 aa  112  3e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_1467  two component transcriptional regulator  33.91 
 
 		 229 aa  112  3e-24  Clostridium phytofermentans ISDg  Bacteria  normal  0.0237528  n/a   
 
 
-
 
NC_007651  BTH_I0642  DNA-binding response regulator  32.72 
 
 		 291 aa  112  3e-24  Burkholderia thailandensis E264  Bacteria  normal  0.743353  n/a   
 
 
-
 
NC_009523  RoseRS_3818  two component transcriptional regulator  28.89 
 
 		 230 aa  112  3e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.386967  normal  0.165932 
 
 
-
 
NC_008228  Patl_2251  two component transcriptional regulator  29.55 
 
 		 240 aa  112  3e-24  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.741785  n/a   
 
 
-
 
NC_012791  Vapar_5197  two component transcriptional regulator, winged helix family  33.03 
 
 		 223 aa  112  3e-24  Variovorax paradoxus S110  Bacteria  normal  0.47869  n/a   
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  29.2 
 
 		 236 aa  112  4.0000000000000004e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  unclonable  0.0000000182155 
 
 
-
 
NC_008752  Aave_4638  two component transcriptional regulator  32.88 
 
 		 224 aa  112  4.0000000000000004e-24  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
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