| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1467 |
|---|
| Symbol | |
|---|
| ID | 5742417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1809907 |
|---|
| End bp | 1810596 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641292569 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001558580 |
|---|
| Protein GI | 160879612 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0237528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAA TATTGATTAT AGAAGATGAT GCAGCGATTG CCGCCATTGA GCGGGATTAT
CTTGCGATTG ACCATTTTGA AGTAGAGATT GCGCTGGACG GGAGAAGTGG TATGGAAAAA
GCCTTGCAGG GCGGCTTTGA TCTGATTCTA CTGGATTTGA TGCTTCCAGG CATCGACGGT
TTTACCGTTT GCTGCAAGCT ACGAGAGACG CTGGACATTC CGATACTGAT GGTCACAGCC
CGGCGGGAGG ACATTGATAA AATACGCGGG CTAGGGCTTG GTGCAGATGA TTACATTGAG
AAGCCTTTTT CTCCAAGCGT GTTGGTAGCA AGAGTTAAGG CGAACTTGGC GCAGTATGCC
AGATTGAAGA AAACGGATAG AACCGCACCA ATACAGCTCA ACATAGGCAG TATCCGCATC
AACACCGATA CCCACAGGGT CTATGTGAAT GACATTGAAA TTGATTTAAA AAATAAAGAA
TACGAGCTTT TGCTGTTTTT GGCGCTCAAC GCGGATGTGG TATTCAACCG GGAAACGCTT
TACGAACGCA TTTGGGGTAT GGACGCCATG GGGGACAACG CCACGGTCGC TGTCCACATT
AATCGGCTAC GGGATAGGAT TGAGGAAGAT CCGGGCAATC CTCGGTATAT CCAGACGGTT
CGTGGTGCGG GTTATCGGCT CAAGGCGTAA
|
|---|
| Protein sequence | MGKILIIEDD AAIAAIERDY LAIDHFEVEI ALDGRSGMEK ALQGGFDLIL LDLMLPGIDG
FTVCCKLRET LDIPILMVTA RREDIDKIRG LGLGADDYIE KPFSPSVLVA RVKANLAQYA
RLKKTDRTAP IQLNIGSIRI NTDTHRVYVN DIEIDLKNKE YELLLFLALN ADVVFNRETL
YERIWGMDAM GDNATVAVHI NRLRDRIEED PGNPRYIQTV RGAGYRLKA
|
|---|
| |