Gene VEA_003617 details

Gene Information

• Locus tag: VEA_003617
• ID: 8557350
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 2220255
• End bp: 2220911
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 646406712
• Product: DNA-binding response regulator
• Protein accession: YP_003286242
• Protein GI: 262394388
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.831618
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCTTAT TACTCGTAGA AGATGACAAA CTACTCGGTC AATCCATGGT GACTTCATTA 
AGTCGCCATG GGTACACCGT GGATTGGGTG GAAAAAGGCT ATGGCGTGAC TAGCGCACTC 
AAAACAGAAG CGTTCACCGC CGTAATATTG GATCTCACTC TCCCCGATAT CGATGGATTG 
GAAGTTCTGC GTAATATTCG CAAAGGCGGA TTTAAGCTCC CCGTGATGAT ACTTACCGCC 
CGAGACGACA TTCGCGATCG CGTTCAAGGC CTTGATGGCG GCGCAGATGA TTACCTCGGA 
AAACCGTTTG CACTCGAAGA GTTGCTCGCT CGCTTGCGTG TGTTGATTCG CCGTCAATCC 
GGTAGTGCAG AGGAAATCAT TCAAGTTGGA CAGTTGTCTT TATCCTTATC GGAACAAAGC 
ATTCGCTACG ATGACGCGCC GCTTAAACTC ACACGCAATG AATTTAAAAT CCTCACCAGC 
TTGATGACGA ACGCCGGACG CGTGCAAAGT AAGGAGCAAT TGCAACAATC ACTACACGGC 
TGGGATGAAG GTTCAAGCGA CAACGCTATC GAAGTTCATA TTCACAATTT GCGTAAAAAA 
GCGCCCAAAG TGGTCATTAA AAATATTCGC GGTGTGGGGT ACATTCTTGA AAGATAA 

 

Protein sequence

MRLLLVEDDK LLGQSMVTSL SRHGYTVDWV EKGYGVTSAL KTEAFTAVIL DLTLPDIDGL 
EVLRNIRKGG FKLPVMILTA RDDIRDRVQG LDGGADDYLG KPFALEELLA RLRVLIRRQS 
GSAEEIIQVG QLSLSLSEQS IRYDDAPLKL TRNEFKILTS LMTNAGRVQS KEQLQQSLHG 
WDEGSSDNAI EVHIHNLRKK APKVVIKNIR GVGYILER