Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3820 |
Symbol | |
ID | 3960075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 4263031 |
End bp | 4263696 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637918645 |
Product | two component transcriptional regulator |
Protein accession | YP_525050 |
Protein GI | 89902579 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTGC TGCTGGTCGA GGACGACTTG ATGATTGGGG AATCCGTGCT GGACTTGCTC CGGGCGGAAG GCTACGCGGT CGATTGGGTC AAGGATGGGG AGATGGCCGA CACCGCACTC GACTCCCAGA CCTACGATTT GGTGCTGCTT GACCTGGGGC TGCCGCGCCG GGATGGGCTT GCGGTATTGC GCCGGCTGCG CGCTCGCAAG GACCGCACAC CGGTGCTCGT CGCCACGGCA CGCGACGCCA TAGCGCAACG CGTTGAAGGC CTGGACATGG GTGCCGATGA CTACATCGTC AAGCCCTACG AACTCGATGA GCTGCTGGCC CGCATACGGG CCTTGATCCG CCGCGCGGCT GGCCGCGCAG AGCCGGTCTA TGAACACCTG GGTGTAAGCA TCAACCCGGT CACGCGTGAG GTGCTGCTTG ACGGACAGGC CGTGGTGCTG TCGGCACGGG AATGGTCCAT CCTGGAACTG CTGCTTGCGC GCCCGGGCAT GGTGCTTTCC CGCAGGCAAC TTGAAGAAAA ACTCTACAGC TGGAAAGATG ACCTCAGCAG CAATGCGGTC GAGGTGTATA TCCACGGACT GCGCAAGAAA CTGGGGCCTC GCATCATCCA GAATGTGCGG GGTGTTGGTT ACATGATTCC CCAAAGCGCC CCATGA
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Protein sequence | MRLLLVEDDL MIGESVLDLL RAEGYAVDWV KDGEMADTAL DSQTYDLVLL DLGLPRRDGL AVLRRLRARK DRTPVLVATA RDAIAQRVEG LDMGADDYIV KPYELDELLA RIRALIRRAA GRAEPVYEHL GVSINPVTRE VLLDGQAVVL SAREWSILEL LLARPGMVLS RRQLEEKLYS WKDDLSSNAV EVYIHGLRKK LGPRIIQNVR GVGYMIPQSA P
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