Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3997 |
Symbol | |
ID | 7297336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 4449373 |
End bp | 4450056 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643596804 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002494384 |
Protein GI | 220919080 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTCT TGCTGGTCGA GGATGAGGAC CGGGTCGCGC GCGTGCTGGC GCGCGGCCTG GCCGAGGAAG GCCACCAGGT GGACGTCTGC GGCACGGGCC TCGCGGCCCG CGAGCAGGCG ACCACCATCG CCTACGACGT GGTGCTGCTC GACTGGTCGC TGCCCGACCT CGACGGCATC TCGGTGCTGC GCGAGTGGCG GTCGCGGGGC CTGCGCACGC CGGTGCTGCT GCTCACCGCC CGCGGCTCGA CCGGCGAGAA GGTCACCGGG CTGCGCGCCG GAGCCGACGA CTACCTGGTG AAGCCGTTCG ACTTCGACGA GCTCATCGCC CGCATCGAGG CGCTGCACCG CCGCGGCGGC GCCACCGACG TCTCGGCGCT CGGGCCGGTG ACGCTCGACG CCCGCCGGCG GGCGCTGATC GTGGGCGCGC AGTCCGAGAC GCTCACCGCC CGCGAGTACG GCCTCGTGGC CGAGCTGGCC CGCCACGCCG GCGAGGTGCT CTCGCGCACC CGCCTCATCG AGACGGTGTG GGGCCAGGAG TTCGAGGGCA ACTCGAACGT GGTGGACGTG TACGTCGGCT ACCTCCGCAC CAAGCTCGAG CGGCTCGGCG CGCCGGGCGT GCGCATCGAG TCGGTGCGCG GGGTGGGCTA CCGGCTGGTG GTGCCGCCGG GGGGCGCCGC GTGA
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Protein sequence | MKLLLVEDED RVARVLARGL AEEGHQVDVC GTGLAAREQA TTIAYDVVLL DWSLPDLDGI SVLREWRSRG LRTPVLLLTA RGSTGEKVTG LRAGADDYLV KPFDFDELIA RIEALHRRGG ATDVSALGPV TLDARRRALI VGAQSETLTA REYGLVAELA RHAGEVLSRT RLIETVWGQE FEGNSNVVDV YVGYLRTKLE RLGAPGVRIE SVRGVGYRLV VPPGGAA
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