| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2251 |
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| Symbol | |
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| ID | 4172405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2736527 |
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| End bp | 2737249 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055261 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_661823 |
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| Protein GI | 109898568 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.741785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTAACAT TCGTAAAACT TTGTTTAATG TGTCACAAAA GAGCCACCAA CATGATTAAT
GTATTACTGG TTGAAGATGA CATCGATTTA GCCAGCACAG TTGTCGACTA CCTTGAACTT
GAGTCTATGC AATGTGACCA TGCCAGCAAT GGGCTCATGG GTTTACATTT GATTGAACGC
CAATCATATC AAGTCATCAT CTTGGATATC AATATGCCCA AGATGGATGG TATTACCTTG
TGTAAACGCA TGCGCGAATT AGGTATTGAT ACTCCCGTAC TCATGCTAAC CGCTAGGGAT
ACGCTGGATA ATAAATTAGA AGGGTTTCAA GCTGGTAGCG ATGATTATTT GGTTAAACCT
TTTGCTATGC AGGAGCTGGT AGCTCGCATT CAAGTGCTTG GGCGTAGGCG TAGCGGTGAA
GTAAAGCGCT TATCGGTGGG CGACCTTAAT TTTGATTTAA CCCAGCGTAT TGCTTCATTC
AAGCAACACC CTCTCAAACT CTCCCCCACT GCGCTTAAAA TTCTCGAGGT CCTCATGCGC
GCCAGCCCGC AAACCGTTAC TCGGCAAAAG ATTATTCAGA GCGTTTGGGG TGACGATCAG
CCAGACAGCA ATAGCCTAAA AGTCCACATT TACCACTTGC GTAAACAGCT CGATGCTTAT
GAAGCATCGA TTACGTTAGA TACTGTTGCC AGTGTCGGCT TTGCAATAAA AAAGAAAGCA
TAA
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| Protein sequence | MLTFVKLCLM CHKRATNMIN VLLVEDDIDL ASTVVDYLEL ESMQCDHASN GLMGLHLIER
QSYQVIILDI NMPKMDGITL CKRMRELGID TPVLMLTARD TLDNKLEGFQ AGSDDYLVKP
FAMQELVARI QVLGRRRSGE VKRLSVGDLN FDLTQRIASF KQHPLKLSPT ALKILEVLMR
ASPQTVTRQK IIQSVWGDDQ PDSNSLKVHI YHLRKQLDAY EASITLDTVA SVGFAIKKKA
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