More than 300 homologs were found in PanDaTox collection
for query gene Ndas_2190 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_2190  two component transcriptional regulator, LuxR family  100 
 
 
218 aa  427  1e-119  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  6.43495e-08  hitchhiker  0.000215707 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  62.8 
 
 
214 aa  249  2e-65  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  58.64 
 
 
224 aa  243  2e-63  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  48.82 
 
 
244 aa  218  8e-56  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.61 
 
 
229 aa  209  2e-53  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  54.25 
 
 
213 aa  209  3e-53  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  49.33 
 
 
224 aa  207  7e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  51.39 
 
 
239 aa  207  1e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  49.09 
 
 
224 aa  204  7e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  48.62 
 
 
225 aa  203  1e-51  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  52.75 
 
 
215 aa  203  1e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  50.67 
 
 
221 aa  203  1e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  49.33 
 
 
222 aa  203  2e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  49.54 
 
 
225 aa  202  3e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.85 
 
 
239 aa  202  3e-51  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  51.15 
 
 
225 aa  202  3e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  55.14 
 
 
216 aa  202  4e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.7 
 
 
225 aa  202  4e-51  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  48.66 
 
 
229 aa  202  5e-51  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  49.32 
 
 
228 aa  201  7e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  51.14 
 
 
225 aa  201  9e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  51.85 
 
 
225 aa  201  1e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  51.58 
 
 
227 aa  199  2e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  48.42 
 
 
226 aa  200  2e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  49.77 
 
 
230 aa  199  3e-50  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  50 
 
 
220 aa  199  3e-50  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  48.62 
 
 
220 aa  198  5e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  46.79 
 
 
218 aa  198  5e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  40.39 
 
 
261 aa  197  1e-49  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  48.4 
 
 
224 aa  197  1e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  50.67 
 
 
223 aa  197  1e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  49.07 
 
 
217 aa  196  3e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  52.58 
 
 
215 aa  195  5e-49  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  49.32 
 
 
230 aa  194  6e-49  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  48.88 
 
 
226 aa  194  7e-49  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.67 
 
 
226 aa  194  9e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  46.02 
 
 
233 aa  194  1e-48  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  48.66 
 
 
227 aa  194  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  49.3 
 
 
220 aa  194  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  48 
 
 
234 aa  193  2e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  49.32 
 
 
221 aa  192  3e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  53 
 
 
220 aa  192  3e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  47.32 
 
 
231 aa  192  3e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.11 
 
 
230 aa  192  4e-48  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  48.23 
 
 
226 aa  191  7e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  49.77 
 
 
221 aa  191  7e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  48.84 
 
 
217 aa  191  8e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  45.95 
 
 
221 aa  191  8e-48  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  50 
 
 
223 aa  191  8e-48  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  48.17 
 
 
228 aa  191  9e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  48.07 
 
 
239 aa  190  1e-47  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  50.45 
 
 
223 aa  190  2e-47  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  3.86408e-05  hitchhiker  0.000570848 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  47.93 
 
 
219 aa  189  2e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0647  two component transcriptional regulator, LuxR family  48.39 
 
 
212 aa  190  2e-47  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.518884  n/a   
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  52.83 
 
 
217 aa  189  2e-47  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.58 
 
 
222 aa  190  2e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  46.36 
 
 
218 aa  190  2e-47  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  50 
 
 
222 aa  189  2e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  46.4 
 
 
230 aa  189  3e-47  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  50.23 
 
 
219 aa  189  3e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  47.73 
 
 
221 aa  189  3e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  53.24 
 
 
230 aa  189  4e-47  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  45.83 
 
 
217 aa  188  5e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  7.94288e-08  unclonable  3.32591e-08 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  47.87 
 
 
213 aa  187  7e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  50.67 
 
 
223 aa  188  7e-47  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  49.77 
 
 
224 aa  187  1e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  47.37 
 
 
230 aa  187  1e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.11 
 
 
236 aa  187  1e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  51.4 
 
 
219 aa  186  2e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  47.09 
 
 
222 aa  187  2e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  50.23 
 
 
225 aa  186  2e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  50.7 
 
 
302 aa  186  3e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  47.17 
 
 
230 aa  186  3e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  50.23 
 
 
234 aa  185  4e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  51.42 
 
 
216 aa  185  4e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  47 
 
 
215 aa  185  4e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  50.68 
 
 
228 aa  185  4e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.91 
 
 
244 aa  184  6e-46  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  48.84 
 
 
225 aa  185  6e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  49.53 
 
 
219 aa  184  7e-46  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  45.85 
 
 
242 aa  184  8e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  1.13212e-10 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  44.19 
 
 
218 aa  184  9e-46  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  49.52 
 
 
220 aa  184  1e-45  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  47.73 
 
 
221 aa  184  1e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  47.49 
 
 
225 aa  184  1e-45  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  47.69 
 
 
211 aa  184  1e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  47.95 
 
 
247 aa  184  1e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  46.19 
 
 
232 aa  183  2e-45  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  47.22 
 
 
218 aa  183  2e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  47.89 
 
 
226 aa  183  2e-45  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  42.98 
 
 
250 aa  183  2e-45  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  47 
 
 
221 aa  182  2e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  43.86 
 
 
228 aa  182  3e-45  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  46.36 
 
 
225 aa  182  3e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  47.51 
 
 
226 aa  182  4e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  50.46 
 
 
219 aa  181  5e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  45.05 
 
 
241 aa  182  5e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  48.61 
 
 
215 aa  181  6e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  45.98 
 
 
227 aa  181  7e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_0671  putative response regulator  43.21 
 
 
248 aa  181  7e-45  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
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